RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CSPG5O95196 566 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 PABPC1P11940 636 aaKnown RBP9.11□□□□□ -0.95
PDPN-201ENST00000294489 CTSOP43234 321 aaPredicted RBP9.11□□□□□ -0.95
PDPN-201ENST00000294489 TIAL1Q01085 375 aaKnown RBP eCLIP9.11□□□□□ -0.95
PDPN-201ENST00000294489 EML3Q32P44 896 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 DNAL1Q4LDG9 190 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 ARMC12Q5T9G4 340 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 ZNF549Q6P9A3 640 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 ACAD11Q709F0 780 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 RBM23Q86U06 439 aaKnown RBP9.11□□□□□ -0.95
PDPN-201ENST00000294489 PIM3Q86V86 326 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 AFAP1L2Q8N4X5 818 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 PCDH20Q8N6Y1 951 aaKnown RBP9.11□□□□□ -0.95
PDPN-201ENST00000294489 OR2AP1Q8NGE2 309 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 GRIN3AQ8TCU5 1115 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 MRPL38Q96DV4 380 aaKnown RBP9.11□□□□□ -0.95
PDPN-201ENST00000294489 CMTM5Q96DZ9 223 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 ASB16Q96NS5 453 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 TAS2R13Q9NYV9 303 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 PKP3Q9Y446 797 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 A8MT66 165 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 SMIM24O75264 130 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 SRP72O76094 671 aaKnown RBP9.11□□□□□ -0.95
PDPN-201ENST00000294489 RHOBTB1O94844 696 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 IGSF6O95976 241 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 CD9P21926 228 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 TTPAP49638 278 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 GAB4Q2WGN9 574 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 SLC9B1Q4ZJI4 515 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 AARS2Q5JTZ9 985 aaKnown RBP9.11□□□□□ -0.95
PDPN-201ENST00000294489 LY6G5CQ5SRR4 150 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 C22orf39Q6P5X5 142 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 GPR149Q86SP6 731 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 NPAS3Q8IXF0 933 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 KIRREL3Q8IZU9 778 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 MOCOSQ96EN8 888 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 MYO19Q96H55 970 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 MRGPRX3Q96LB0 322 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 BBS2Q9BXC9 721 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 TM6SF2Q9BZW4 377 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 C1orf21Q9H246 121 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 ALG9Q9H6U8 611 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 CD248Q9HCU0 757 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 ACSS2Q9NR19 701 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 ZDHHC2Q9UIJ5 367 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 MSRAQ9UJ68 235 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 SLC27A6Q9Y2P4 619 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 LAMA2P24043 3122 aaKnown RBP9.11□□□□□ -0.95
PDPN-201ENST00000294489 NEMP2A6NFY4 417 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 NEDD8-MDP1E9PL57 170 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 ZNF37AP17032 561 aaPredicted RBP9.11□□□□□ -0.95
PDPN-201ENST00000294489 FCARP24071 287 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 MC4RP32245 332 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 BMP8BP34820 402 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 PGM1P36871 562 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 MYLK3Q32MK0 819 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 TMEM215Q68D42 235 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 TMEM207Q6UWW9 146 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 ISCA2Q86U28 154 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 LSMEM2Q8N112 164 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 AHI1Q8N157 1196 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 RYBPQ8N488 228 aaPredicted RBP9.11□□□□□ -0.95
PDPN-201ENST00000294489 RBM15BQ8NDT2 890 aaKnown RBP9.11□□□□□ -0.95
PDPN-201ENST00000294489 AGAP11Q8TF27 550 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 GDPD5Q8WTR4 605 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 STON2Q8WXE9 905 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 ING5Q8WYH8 240 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 EID2BQ96D98 161 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 GPR63Q9BZJ6 419 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 CYP4F12Q9HCS2 524 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 POLR3BQ9NW08 1133 aaPredicted RBP9.11□□□□□ -0.95
PDPN-201ENST00000294489 GDE1Q9NZC3 331 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 CDYLQ9Y232 598 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 PLXNA2O75051 1894 aa9.11□□□□□ -0.95
PDPN-201ENST00000294489 TRPC5OSA6NMA1 111 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 E9PBE3 544 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 KLHL41O60662 606 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 CYP17A1P05093 508 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 PYGLP06737 847 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 TPBGLP0DKB5 382 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 EZRP15311 586 aaKnown RBP9.1□□□□□ -0.95
PDPN-201ENST00000294489 FMO4P31512 558 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 HMGCLP35914 325 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 CCR10P46092 362 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 COPAP53621 1224 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 SNRPD1P62314 119 aaKnown RBP9.1□□□□□ -0.95
PDPN-201ENST00000294489 XIAPP98170 497 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 ECT2LQ008S8 904 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 BCL2L1Q07817 233 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 DHCR24Q15392 516 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 ZRANB3Q5FWF4 1079 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 FAM78AQ5JUQ0 283 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 PPP2R2DQ66LE6 453 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 ETFBKMTQ8IXQ9 262 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 C12orf76Q8N812 135 aaPredicted RBP9.1□□□□□ -0.95
PDPN-201ENST00000294489 MAPK15Q8TD08 544 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 FRS2Q8WU20 508 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 LPGAT1Q92604 370 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 PHF21BQ96EK2 531 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 FAR2Q96K12 515 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms