RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ZC3H13Q5T200 1668 aaKnown RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 PPM1BO75688 479 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 RABGGTBP53611 331 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 MANFP55145 182 aaKnown RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 POLR2LP62875 67 aaKnown RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 RHBDF2Q6PJF5 856 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 FRMD7Q6ZUT3 714 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 TTC29Q8NA56 475 aaPredicted RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 NKD1Q969G9 470 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 QRFPRQ96P65 431 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 NOBOXO60393 691 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 IL1BP01584 269 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 DBIP07108 87 aaKnown RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 HKDC1Q2TB90 917 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 OR2L5Q8NG80 312 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 TCF25Q9BQ70 676 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 WDR12Q9GZL7 423 aaKnown RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 SNX7Q9UNH6 387 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 ITSN1Q15811 1721 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 CPSF4LA6NMK7 179 aaKnown RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 NOTOA8MTQ0 251 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 OTCP00480 354 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 IGFBP5P24593 272 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 CDK9P50750 372 aaKnown RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 ZNF460Q14592 562 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 UBE2R2Q712K3 238 aaPredicted RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 SH3RF1Q7Z6J0 888 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 PPM1MQ96MI6 270 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 B4GALT5O43286 388 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 AMHP03971 560 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 LGALS2P05162 132 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 ATP5C1P36542 298 aaKnown RBP16.08■□□□□ 0.17
SSRP1-202ENST00000293880 RAB27AP51159 221 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 THOP1P52888 689 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 NRG3P56975 720 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 C1orf189Q5VU69 101 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 DUPD1Q68J44 220 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 GPR180Q86V85 440 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 CIR1Q86X95 450 aaPredicted RBP16.08■□□□□ 0.17
SSRP1-202ENST00000293880 EXD2Q9NVH0 621 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 HPF1Q9NWY4 346 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 RPTORQ8N122 1335 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 TRBV23OR9-2A0A075B6M9 112 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 MAGEC1O60732 1142 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 SERPINA1P01009 418 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 PSMD5Q16401 504 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 ECM1Q16610 540 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 TYSND1Q2T9J0 566 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 ZNF730Q6ZMV8 503 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 PPP1R16AQ96I34 528 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 GPER1Q99527 375 aa16.08■□□□□ 0.17
SSRP1-202ENST00000293880 P2RX7Q99572 595 aaKnown RBP16.08■□□□□ 0.17
SSRP1-202ENST00000293880 DPPA5A6NC42 116 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 YDJCA8MPS7 323 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 OR7A10O76100 309 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 LRIG2O94898 1065 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 TTPAP49638 278 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 CXCL9Q07325 125 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 RFWD3Q6PCD5 774 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 AHSA2Q719I0 299 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 EIF1ADQ8N9N8 165 aaKnown RBP16.08■□□□□ 0.16
SSRP1-202ENST00000293880 ELAC1Q9H777 363 aaKnown RBP16.08■□□□□ 0.16
SSRP1-202ENST00000293880 FBXO9Q9UK97 447 aaPredicted RBP16.08■□□□□ 0.16
SSRP1-202ENST00000293880 CATP04040 527 aaKnown RBP16.08■□□□□ 0.16
SSRP1-202ENST00000293880 SMARCB1Q12824 385 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 PHC2Q8IXK0 858 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 ZFP28Q8NHY6 868 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 EBNA1BP2Q99848 306 aaKnown RBP16.08■□□□□ 0.16
SSRP1-202ENST00000293880 GNEQ9Y223 722 aaKnown RBP16.08■□□□□ 0.16
SSRP1-202ENST00000293880 hCG_2039718K7EN88 272 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 PGRMC2O15173 223 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 UGT2B11O75310 529 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 IDO1P14902 403 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 ITPKBP27987 946 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 AKT2P31751 481 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 MAGEA12P43365 314 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 SNRPD1P62314 119 aaKnown RBP16.08■□□□□ 0.16
SSRP1-202ENST00000293880 RGS1Q08116 209 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 GTPBP3Q969Y2 492 aaKnown RBP16.08■□□□□ 0.16
SSRP1-202ENST00000293880 C11orf24Q96F05 449 aaPredicted RBP16.08■□□□□ 0.16
SSRP1-202ENST00000293880 GLIS2Q9BZE0 524 aaPredicted RBP16.08■□□□□ 0.16
SSRP1-202ENST00000293880 GIT1Q9Y2X7 761 aa16.08■□□□□ 0.16
SSRP1-202ENST00000293880 METTL21EPA6NDL7 271 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 F7P08709 466 aaPredicted RBP16.07■□□□□ 0.16
SSRP1-202ENST00000293880 SLC26A2P50443 739 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 POLR2JP52435 117 aaKnown RBP16.07■□□□□ 0.16
SSRP1-202ENST00000293880 PITRM1Q5JRX3 1037 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 TOR1AIP1Q5JTV8 583 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.07■□□□□ 0.16
SSRP1-202ENST00000293880 DIRAS2Q96HU8 199 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 UXTQ9UBK9 157 aaPredicted RBP16.07■□□□□ 0.16
SSRP1-202ENST00000293880 TRAV19A0A0A6YYK7 116 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 A0A1W2PQ67 120 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 FAPQ12884 760 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 NAT14Q8WUY8 206 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 WDR18Q9BV38 432 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 IKZF2Q9UKS7 526 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 UMODL1Q5DID0 1318 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 CXCR3P49682 368 aa16.07■□□□□ 0.16
SSRP1-202ENST00000293880 ARFIP1P53367 373 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms