RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 ANO7Q6IWH7 933 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 ESRP1Q6NXG1 681 aaKnown RBP15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 NEK5Q6P3R8 708 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 PTF1AQ7RTS3 328 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 ITIH5Q86UX2 942 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 TCAIMQ8N3R3 496 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 SLC4A11Q8NBS3 891 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 COPS4Q9BT78 406 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 COL20A1Q9P218 1284 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 DNMT3LQ9UJW3 386 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 PIP5K1BO14986 540 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 AZGP1P25311 298 aaKnown RBP15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 NTSP30990 170 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 BRD9Q9H8M2 597 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 MARCH7Q9H992 704 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 MCUBQ9NWR8 336 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 CMTM6Q9NX76 183 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 hCG_2039718K7EN88 272 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 OR4Q2P0C623 313 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 BUD31P41223 144 aaPredicted RBP15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 PUDPQ08623 228 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 TREML2Q5T2D2 321 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 KRT77Q7Z794 578 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 DEFB132Q7Z7B7 95 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 DSG4Q86SJ6 1040 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 ESAMQ96AP7 390 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 TAMM41Q96BW9 452 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 FEM1CQ96JP0 617 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 FEM1AQ9BSK4 669 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 TMEM138Q9NPI0 162 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 KANSL3Q9P2N6 904 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 AGO1Q9UL18 857 aaKnown RBP15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 SPATA31A6Q5VVP1 1343 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 PQBP1O60828 265 aaKnown RBP15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 RNASEH1O60930 286 aaKnown RBP15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 LRIG2O94898 1065 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 EFNA1P20827 205 aaPredicted RBP15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 LPOP22079 712 aaPredicted RBP15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 S100A1P23297 94 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 CTSKP43235 329 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 NDUFV1P49821 464 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 DSC2Q02487 901 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 PRKD1Q15139 912 aaPredicted RBP15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 CYP1B1Q16678 543 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 ANKRD46Q86W74 232 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 CIR1Q86X95 450 aaPredicted RBP15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 HEXDCQ8WVB3 486 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 DCAKDQ8WVC6 231 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 CD101Q93033 1021 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 Q96MT0 163 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 GATA5Q9BWX5 397 aaPredicted RBP15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 DHX33Q9H6R0 707 aaKnown RBP15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 PTTG2Q9NZH5 202 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 SF3B1O75533 1304 aaKnown RBP eCLIP15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 PTPN3P26045 913 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 CDH15P55291 814 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 COPZ1P61923 177 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 C9orf131Q5VYM1 1079 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 ABHD16BQ9H3Z7 469 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 CNTNAP1P78357 1384 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 STX16-NPEPL1H3BU86 382 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 AP2A2O94973 939 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 IL18Q14116 193 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 PLA2G4EQ3MJ16 856 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 IKBIPQ70UQ0 350 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 FNDC11Q9BVV2 318 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 TDRD1Q9BXT4 1180 aaKnown RBP15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 MAT2BQ9NZL9 334 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 SLC7A8Q9UHI5 535 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 RGS10O43665 173 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 MTAPQ13126 283 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 RAPSNQ13702 412 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 KHDRBS2Q5VWX1 349 aaKnown RBP15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 TXNRD3NBQ6F5E7 133 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 NAT16Q8N8M0 369 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 SUN5Q8TC36 379 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 TP53INP1Q96A56 240 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 RHOBTB2Q9BYZ6 727 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 AAASQ9NRG9 546 aa15.28■□□□□ 0.04
SHROOM4-201ENST00000289292 DHX15O43143 795 aaKnown RBP15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 SLC28A2O43868 658 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 PRKAR1AP10644 381 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 CYP2C18P33260 490 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 GRIA1P42261 906 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 MXD1Q05195 221 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 NADK2Q4G0N4 442 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 LCLAT1Q6UWP7 414 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 ZNF317Q96PQ6 595 aaPredicted RBP15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 GPR21Q99679 349 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 UNC93B1Q9H1C4 597 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 SSU72Q9NP77 194 aaKnown RBP15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 ING3Q9NXR8 418 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 TRIM17Q9Y577 477 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 AP2A1O95782 977 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 SNHG28P0DPA3 235 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 POTEHQ6S545 545 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 OR4K2Q8NGD2 314 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 PPP1R14AQ96A00 147 aa15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 RBM4BQ9BQ04 359 aaKnown RBP15.27■□□□□ 0.04
SHROOM4-201ENST00000289292 RBM4Q9BWF3 364 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms