RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 KPNA3O00505 521 aaPredicted RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC22A1O15245 554 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 SHOX2O60902 331 aaPredicted RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 INSRRP14616 1297 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ARF4P18085 180 aaPredicted RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 MBTD1Q05BQ5 628 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 PCBP1Q15365 356 aaKnown RBP eCLIP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 FNDC3BQ53EP0 1204 aaKnown RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 C6orf52Q5T4I8 152 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 FAM43BQ6ZT52 329 aaPredicted RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 FAM183BPQ6ZVS7 135 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 GPR65Q8IYL9 337 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 RERGQ96A58 199 aaPredicted RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ZDHHC6Q9H6R6 413 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ABCG2Q9UNQ0 655 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 PLCL2Q9UPR0 1127 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 H3BRB1 525 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 TULP2O00295 520 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ATP6V1G1O75348 118 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 TRIM3O75382 744 aaPredicted RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 SERPINA3P01011 423 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 TRBC1P01850 177 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 DNTTP04053 509 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 KIR3DL1P43629 444 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 IST1P53990 364 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 SIM2Q14190 667 aaPredicted RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 PLEKHG4Q58EX7 1191 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ARRDC4Q8NCT1 418 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 CCDC107Q8WV48 283 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 TSEN15Q8WW01 171 aaKnown RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC38A4Q969I6 547 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 SPACA7Q96KW9 195 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 NMUR2Q9GZQ4 415 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 TUT1Q9H6E5 874 aaKnown RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ANKHQ9HCJ1 492 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 NUP50Q9UKX7 468 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ABHD14A-ACY1A0A1B0GW23 586 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ATP5C1P36542 298 aaKnown RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 DNASE1L1P49184 302 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 CCR3P51677 355 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 OR2B6P58173 313 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 CDK18Q07002 472 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 PEX6Q13608 980 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 FBXO16Q8IX29 292 aaPredicted RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 PARP8Q8N3A8 854 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 SHC3Q92529 594 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 SUSD6Q92537 303 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 LINGO1Q96FE5 620 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 MTRRQ9UBK8 725 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 IPO13O94829 963 aaKnown RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 USP17L7P0C7H9 530 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 RAPSNQ13702 412 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 PAN2Q504Q3 1202 aaKnown RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 EIF5AL1Q6IS14 154 aaKnown RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ZNF730Q6ZMV8 503 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ECHDC2Q86YB7 292 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 GPR156Q8NFN8 814 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 C9orf43Q8TAL5 461 aaPredicted RBP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ADAM32Q8TC27 787 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 BRD9Q9H8M2 597 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC17A7Q9P2U7 560 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 CLEC4AQ9UMR7 237 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 PCDHB1Q9Y5F3 818 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 PTPRUQ92729 1446 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ALDH4A1P30038 563 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 PHC1P78364 1004 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 CYP4F8P98187 520 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ZNF234Q14588 700 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 QPCTQ16769 361 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 DCST1Q5T197 706 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 AADACL2Q6P093 401 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ZNF615Q8N8J6 731 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ACER1Q8TDN7 264 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 CSGALNACT1Q8TDX6 532 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 CXorf40BQ96DE9 158 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 CD320Q9NPF0 282 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 RAB23Q9ULC3 237 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 NEXMIFQ5QGS0 1516 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 MID1O15344 667 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 PNLIPRP1P54315 467 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 KLHL22Q53GT1 634 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 MIIPQ5JXC2 388 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 KCTD8Q6ZWB6 473 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 OR8H3Q8N146 312 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 CBR4Q8N4T8 237 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 HASPINQ8TF76 798 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 UFD1Q92890 307 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 ERLEC1Q96DZ1 483 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 GPER1Q99527 375 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 TPK1Q9H3S4 243 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 LRTM1Q9HBL6 345 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 CALML5Q9NZT1 146 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 MARK1Q9P0L2 795 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 LGALS13Q9UHV8 139 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 IKZF2Q9UKS7 526 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 PRELID1Q9Y255 219 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 A0A1W2PPM1 405 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 KANTRA0A1W2PQU2 76 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 FABP12A6NFH5 140 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms