RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 METTL21CQ5VZV1 264 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 ZYG11AQ6WRX3 759 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 EFCAB3Q8N7B9 438 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 PIGXQ8TBF5 258 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 SLC44A1Q8WWI5 657 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 OMDQ99983 421 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 MAGEE1Q9HCI5 957 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 ZFP14Q9HCL3 533 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 POLLQ9UGP5 575 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 FAM208AQ9UK61 1670 aaKnown RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 SHOX2O60902 331 aaPredicted RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 FGBP02675 491 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 AKR1A1P14550 325 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 BDNFP23560 247 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 CDH5P33151 784 aaPredicted RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 MNDAP41218 407 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 PITPNAQ00169 270 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 BEND7Q8N7W2 519 aaPredicted RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 HASPINQ8TF76 798 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 CENPNQ96H22 339 aaPredicted RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 FPGTO14772 594 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 METTL18O95568 372 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 CHKAP35790 457 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 RPL26P61254 145 aaKnown RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 ZNF730Q6ZMV8 503 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 C12orf50Q8NA57 414 aaPredicted RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 KLHL23Q8NBE8 558 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 PRMT6Q96LA8 375 aaPredicted RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 FCRL4Q96PJ5 515 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 PIH1D1Q9NWS0 290 aaKnown RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 ZNF180Q9UJW8 692 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 TRAF6Q9Y4K3 522 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 PITPNM1O00562 1244 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 XKRYO14609 159 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 GIMD1P0DJR0 217 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 CTSKP43235 329 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 EIPR1Q53HC9 387 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 PIK3R6Q5UE93 754 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 USP43Q70EL4 1123 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 RANBP3LQ86VV4 465 aaPredicted RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 RASGEF1CQ8N431 466 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 DNAJB3Q8WWF6 145 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 AP2M1Q96CW1 435 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 MTFMTQ96DP5 389 aaKnown RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 ZNF354BQ96LW1 612 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 MAT2BQ9NZL9 334 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 ADGRB1O14514 1584 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 AP5Z1O43299 807 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 LGALS2P05162 132 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 RALGDSQ12967 914 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 IL18R1Q13478 541 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 QSOX2Q6ZRP7 698 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 SNRNP25Q9BV90 132 aaKnown RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 FETUBQ9UGM5 382 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 ADGRE2Q9UHX3 823 aa7.96□□□□□ -1.14
LIMD1-201ENST00000273317 MRPS7Q9Y2R9 242 aaKnown RBP7.96□□□□□ -1.14
LIMD1-201ENST00000273317 IFNA16P05015 189 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 CTSEP14091 401 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 DPEP1P16444 411 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 ATF6P18850 670 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 PARP15Q460N3 678 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 C16orf46Q6P387 395 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 GPR156Q8NFN8 814 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 NDNQ99608 321 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 ANKHQ9HCJ1 492 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 PTPRHQ9HD43 1115 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 CD320Q9NPF0 282 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 IL17RBQ9NRM6 502 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 DUOX1Q9NRD9 1551 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 MANSC4A6NHS7 340 aaPredicted RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 POMCP01189 267 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 SLC35G4P0C7Q5 338 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 CBX2Q14781 532 aaPredicted RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 ADNP2Q6IQ32 1131 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 UNC5BQ8IZJ1 945 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 MYO19Q96H55 970 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 MFSD14AQ96MC6 490 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 DUSP16Q9BY84 665 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 NOL11Q9H8H0 719 aaKnown RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 SLC35C2Q9NQQ7 365 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 TAS2R7Q9NYW3 318 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 AKAP12Q02952 1782 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 MED22Q15528 200 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 USP41Q3LFD5 358 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 ATP13A5Q4VNC0 1218 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 PLPPR4Q7Z2D5 763 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 SH3RF1Q7Z6J0 888 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 GBA2Q9HCG7 927 aaPredicted RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 AGO1Q9UL18 857 aaKnown RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 MEGF6O75095 1541 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 FADS2P1A8MWK0 482 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 DHX15O43143 795 aaKnown RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 ATG13O75143 517 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 CCNKO75909 580 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 ALDH3A2P51648 485 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 EIF5AP63241 154 aaKnown RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 HSPA14Q0VDF9 509 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 SPATS1Q496A3 300 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 ZC3H12AQ5D1E8 599 aaKnown RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 APTXQ7Z2E3 356 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms