RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 BRCA1P38398 1863 aaKnown RBP27.4■■□□□ 1.98
CBX4-201ENST00000269397 MBLAC1A4D2B0 266 aaPredicted RBP27.4■■□□□ 1.98
CBX4-201ENST00000269397 ASPDHA6ND91 283 aa27.4■■□□□ 1.98
CBX4-201ENST00000269397 MTHFD2P13995 350 aa27.4■■□□□ 1.98
CBX4-201ENST00000269397 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.4■■□□□ 1.98
CBX4-201ENST00000269397 SLC25A51Q9H1U9 297 aa27.4■■□□□ 1.98
CBX4-201ENST00000269397 ZFYVE28Q9HCC9 887 aa27.4■■□□□ 1.98
CBX4-201ENST00000269397 E9PAM4 449 aa27.39■■□□□ 1.98
CBX4-201ENST00000269397 CAPN15O75808 1086 aa27.39■■□□□ 1.98
CBX4-201ENST00000269397 HOXD8P13378 290 aaPredicted RBP27.39■■□□□ 1.98
CBX4-201ENST00000269397 TGFBIQ15582 683 aa27.39■■□□□ 1.98
CBX4-201ENST00000269397 ZNF829Q3KNS6 432 aaPredicted RBP27.39■■□□□ 1.98
CBX4-201ENST00000269397 ANKRD26P1Q6NSI1 321 aa27.39■■□□□ 1.98
CBX4-201ENST00000269397 TIGD7Q6NT04 549 aaPredicted RBP27.39■■□□□ 1.98
CBX4-201ENST00000269397 C16orf87Q6PH81 154 aa27.39■■□□□ 1.98
CBX4-201ENST00000269397 BORCS5Q969J3 196 aa27.39■■□□□ 1.98
CBX4-201ENST00000269397 SLC30A3Q99726 388 aa27.39■■□□□ 1.98
CBX4-201ENST00000269397 RTP3Q9BQQ7 232 aa27.39■■□□□ 1.98
CBX4-201ENST00000269397 SLC52A3Q9NQ40 469 aa27.39■■□□□ 1.98
CBX4-201ENST00000269397 IFT80Q9P2H3 777 aaPredicted RBP27.39■■□□□ 1.98
CBX4-201ENST00000269397 OAS3Q9Y6K5 1087 aaKnown RBP27.39■■□□□ 1.98
CBX4-201ENST00000269397 TCRBV5S2A0A599 114 aa27.39■■□□□ 1.97
CBX4-201ENST00000269397 PIRTP0C851 137 aa27.39■■□□□ 1.97
CBX4-201ENST00000269397 PRSS56P0CW18 603 aa27.39■■□□□ 1.97
CBX4-201ENST00000269397 GJA5P36382 358 aa27.39■■□□□ 1.97
CBX4-201ENST00000269397 TIAL1Q01085 375 aaKnown RBP eCLIP27.39■■□□□ 1.97
CBX4-201ENST00000269397 TIGD5Q53EQ6 642 aa27.39■■□□□ 1.97
CBX4-201ENST00000269397 TMEM214Q6NUQ4 689 aaKnown RBP27.39■■□□□ 1.97
CBX4-201ENST00000269397 DCP1BQ8IZD4 617 aaKnown RBP27.39■■□□□ 1.97
CBX4-201ENST00000269397 DOK1Q99704 481 aa27.39■■□□□ 1.97
CBX4-201ENST00000269397 NOL6Q9H6R4 1146 aaKnown RBP27.39■■□□□ 1.97
CBX4-201ENST00000269397 CD320Q9NPF0 282 aa27.39■■□□□ 1.97
CBX4-201ENST00000269397 FGF10O15520 208 aaPredicted RBP27.38■■□□□ 1.97
CBX4-201ENST00000269397 CLASP2O75122 1294 aaKnown RBP27.38■■□□□ 1.97
CBX4-201ENST00000269397 BMXP51813 675 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 PCBP1Q15365 356 aaKnown RBP eCLIP27.38■■□□□ 1.97
CBX4-201ENST00000269397 MANEALQ5VSG8 457 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 KANK2Q63ZY3 851 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 ZNF420Q8TAQ5 688 aaPredicted RBP27.38■■□□□ 1.97
CBX4-201ENST00000269397 RNF145Q96MT1 663 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 C1orf50Q9BV19 199 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 CSNK1G1Q9HCP0 422 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 ANAPC2Q9UJX6 822 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 MAGED1Q9Y5V3 778 aaPredicted RBP27.38■■□□□ 1.97
CBX4-201ENST00000269397 UNCXA6NJT0 531 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 IGLV3-25P01717 112 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 GPIP06744 558 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 HAPLN1P10915 354 aaPredicted RBP27.38■■□□□ 1.97
CBX4-201ENST00000269397 MAGEA10P43363 369 aaPredicted RBP27.38■■□□□ 1.97
CBX4-201ENST00000269397 POLD3Q15054 466 aaPredicted RBP27.38■■□□□ 1.97
CBX4-201ENST00000269397 HABP4Q5JVS0 413 aaKnown RBP27.38■■□□□ 1.97
CBX4-201ENST00000269397 IMP4Q96G21 291 aaKnown RBP27.38■■□□□ 1.97
CBX4-201ENST00000269397 COX4I2Q96KJ9 171 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 MUS81Q96NY9 551 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 ARMC7Q9H6L4 198 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 PKD2L2Q9NZM6 624 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 HS3ST4Q9Y661 456 aa27.38■■□□□ 1.97
CBX4-201ENST00000269397 CRCPO75575 148 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 PRDX3P30048 256 aaKnown RBP27.37■■□□□ 1.97
CBX4-201ENST00000269397 UFM1P61960 85 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 CACNB2Q08289 660 aaPredicted RBP27.37■■□□□ 1.97
CBX4-201ENST00000269397 SEMA3AQ14563 771 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 SIRPB2Q5JXA9 342 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 KIAA2013Q8IYS2 634 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 TMEM86AQ8N2M4 240 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 SGCDQ92629 289 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 FANCEQ9HB96 536 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 ARNT2Q9HBZ2 717 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 INTS7Q9NVH2 962 aaKnown RBP27.37■■□□□ 1.97
CBX4-201ENST00000269397 CORINQ9Y5Q5 1042 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 NCF1BA6NI72 391 aaPredicted RBP27.37■■□□□ 1.97
CBX4-201ENST00000269397 NCF1CA8MVU1 366 aaPredicted RBP27.37■■□□□ 1.97
CBX4-201ENST00000269397 SLC7A4O43246 635 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 PEX11BO96011 259 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 FGF4P08620 206 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 NCF1P14598 390 aaPredicted RBP27.37■■□□□ 1.97
CBX4-201ENST00000269397 MAP4P27816 1152 aaKnown RBP27.37■■□□□ 1.97
CBX4-201ENST00000269397 EEF1DP29692 281 aaKnown RBP27.37■■□□□ 1.97
CBX4-201ENST00000269397 CD97P48960 835 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 NFKB2Q00653 900 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 RAB44Q7Z6P3 723 aaPredicted RBP27.37■■□□□ 1.97
CBX4-201ENST00000269397 RTL3Q8N8U3 475 aaKnown RBP27.37■■□□□ 1.97
CBX4-201ENST00000269397 DDHD1Q8NEL9 900 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 GABPB2Q8TAK5 448 aaPredicted RBP27.37■■□□□ 1.97
CBX4-201ENST00000269397 MFSD1Q9H3U5 465 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 UXTQ9UBK9 157 aaPredicted RBP27.37■■□□□ 1.97
CBX4-201ENST00000269397 ARL5AQ9Y689 179 aa27.37■■□□□ 1.97
CBX4-201ENST00000269397 SNAP91O60641 907 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 LDLRP01130 860 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 INHBBP09529 407 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 GNA12Q03113 381 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 DCDC5Q6ZRR9 648 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 LRRTM3Q86VH5 581 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 DCBLD1Q8N8Z6 715 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 ZBTB8BQ8NAP8 495 aaPredicted RBP27.36■■□□□ 1.97
CBX4-201ENST00000269397 BPIFB6Q8NFQ5 453 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 ACDQ96AP0 544 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 HMCESQ96FZ2 354 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 GPR45Q9Y5Y3 372 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 F2P00734 622 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms