RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 DNAJB13P59910 316 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 TIAL1Q01085 375 aaKnown RBP eCLIP16.74■□□□□ 0.27
SQLE-201ENST00000265896 INTS6LQ5JSJ4 861 aaKnown RBP16.74■□□□□ 0.27
SQLE-201ENST00000265896 RTL3Q8N8U3 475 aaKnown RBP16.74■□□□□ 0.27
SQLE-201ENST00000265896 ITCHQ96J02 903 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 RPRD1AQ96P16 312 aaPredicted RBP16.74■□□□□ 0.27
SQLE-201ENST00000265896 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.74■□□□□ 0.273e-7■■■■□ 23.3
SQLE-201ENST00000265896 UTS2RQ9UKP6 389 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 NUP214P35658 2090 aaPredicted RBP16.74■□□□□ 0.27
SQLE-201ENST00000265896 RHOBTB1O94844 696 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 IL10P22301 178 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 KPNA2P52292 529 aaKnown RBP16.74■□□□□ 0.27
SQLE-201ENST00000265896 LIPEQ05469 1076 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 RBBP7Q16576 425 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 GNASQ5JWF2 1037 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 ADNPQ9H2P0 1102 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 RNF112Q9ULX5 631 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 NOD1Q9Y239 953 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 LOC285556D6RIA3 1793 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 CD3EAPO15446 510 aaKnown RBP16.73■□□□□ 0.27
SQLE-201ENST00000265896 PEX11BO96011 259 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 CLCN5P51795 746 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 HK2P52789 917 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 AIF1P55008 147 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 ESRRGP62508 458 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 SELPLGQ14242 412 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 AARS2Q5JTZ9 985 aaKnown RBP16.73■□□□□ 0.27
SQLE-201ENST00000265896 C9orf131Q5VYM1 1079 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 ELMSAN1Q6PJG2 1045 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 KCTD8Q6ZWB6 473 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 EFHBQ8N7U6 833 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 TSGA13Q96PP4 275 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 ZBED2Q9BTP6 218 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 ANKRD60Q9BZ19 345 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 BTN3A1O00481 513 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 SLC22A2O15244 555 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 LDB2O43679 373 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 CACNG3O60359 315 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 CHRNA1P02708 482 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 ALDH3B2P48448 385 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 OR4D2P58180 307 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 GNA12Q03113 381 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 TRAF2Q12933 501 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 IMPG1Q17R60 797 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 PPP4R4Q6NUP7 873 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 ADGRG5Q8IZF4 528 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 RMDN1Q96DB5 314 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 MS4A4AQ96JQ5 239 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 KCTD14Q9BQ13 255 aaPredicted RBP16.73■□□□□ 0.27
SQLE-201ENST00000265896 ALG2Q9H553 416 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 GMIPQ9P107 970 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 COMMD10Q9Y6G5 202 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 DGKBQ9Y6T7 804 aa16.73■□□□□ 0.27
SQLE-201ENST00000265896 ASPDHA6ND91 283 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 NOBOXO60393 691 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 GLP2RO95838 553 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 THPOP40225 353 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 ADAM17P78536 824 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 GRB14Q14449 540 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 RAB39AQ14964 217 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 PDZD8Q8NEN9 1154 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 GIPC3Q8TF64 312 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 CCDC97Q96F63 343 aaPredicted RBP16.72■□□□□ 0.27
SQLE-201ENST00000265896 SLC25A51Q9H1U9 297 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 RPF2Q9H7B2 306 aaKnown RBP16.72■□□□□ 0.27
SQLE-201ENST00000265896 VPS45Q9NRW7 570 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 CCM2LQ9NUG4 571 aaPredicted RBP16.72■□□□□ 0.27
SQLE-201ENST00000265896 TBC1D13Q9NVG8 400 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 ZBTB11O95625 1053 aaPredicted RBP16.72■□□□□ 0.27
SQLE-201ENST00000265896 PENKP01210 267 aaPredicted RBP16.72■□□□□ 0.27
SQLE-201ENST00000265896 IL7RP16871 459 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 AXLP30530 894 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 RPL26P61254 145 aaKnown RBP16.72■□□□□ 0.27
SQLE-201ENST00000265896 CLCQ05315 142 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 GDF6Q6KF10 455 aaPredicted RBP16.72■□□□□ 0.27
SQLE-201ENST00000265896 METTL23Q86XA0 190 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 ERI1Q8IV48 349 aaKnown RBP16.72■□□□□ 0.27
SQLE-201ENST00000265896 KIAA2013Q8IYS2 634 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 FAM86B1Q8N7N1 296 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 OR52B6Q8NGF0 335 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 IMP4Q96G21 291 aaKnown RBP16.72■□□□□ 0.27
SQLE-201ENST00000265896 TBCDQ9BTW9 1192 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 ABCG8Q9H221 673 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 PLK2Q9NYY3 685 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 U3KQV3 271 aa16.72■□□□□ 0.27
SQLE-201ENST00000265896 NIPSNAP2O75323 286 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 ODC1P11926 461 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 FUT4P22083 530 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 CREB5Q02930 508 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 LAPTM4AQ15012 233 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 SGO1Q5FBB7 561 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 FBXL22Q6P050 247 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 ITIH5Q86UX2 942 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 CAMK1DQ8IU85 385 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 OR2T11Q8NH01 316 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 MUS81Q96NY9 551 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 GPR21Q99679 349 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 EIF2B4Q9UI10 523 aaKnown RBP16.71■□□□□ 0.27
SQLE-201ENST00000265896 ZMYM5Q9UJ78 669 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 PTCH2Q9Y6C5 1203 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms