RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 CD6P30203 668 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 CDH6P55285 790 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 BNIP2Q12982 314 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 SELPLGQ14242 412 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 CBX2Q14781 532 aaPredicted RBP8.75□□□□□ -1.01
VAPB-201ENST00000265619 YIF1BQ5BJH7 314 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 TRNP1Q6NT89 227 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 IFNEQ86WN2 208 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 BRSK2Q8IWQ3 736 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 EID3Q8N140 333 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 PLD5Q8N7P1 536 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 KDM1BQ8NB78 822 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 GALNT6Q8NCL4 622 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 CHAC2Q8WUX2 184 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 PIK3R3Q92569 461 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 SNAPC3Q92966 411 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 C8orf48Q96LL4 319 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 SARDHQ9UL12 918 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 TBX20Q9UMR3 447 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 ATP6AP2A0A1C7CYW4 349 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 ATP6V1G2-DDX39BF2Z307 99 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 MTSS1O43312 755 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 SNX2O60749 519 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 CPNE3O75131 537 aaKnown RBP8.75□□□□□ -1.01
VAPB-201ENST00000265619 ATP6AP2O75787 350 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 DNTTP04053 509 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 CYP2B6P20813 491 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 AVPR1AP37288 418 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 GPD2P43304 727 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 JAK3P52333 1124 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 FASTKQ14296 549 aaKnown RBP8.75□□□□□ -1.01
VAPB-201ENST00000265619 ZNF460Q14592 562 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 SNX17Q15036 470 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 PTCHD3Q3KNS1 767 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 C4orf46Q504U0 113 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 VARS2Q5ST30 1063 aaKnown RBP8.75□□□□□ -1.01
VAPB-201ENST00000265619 FSTL4Q6MZW2 842 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 DENND1BQ6P3S1 775 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 CNSTQ6PJW8 725 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 GALNT7Q86SF2 657 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 ABI1Q8IZP0 508 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 CHDHQ8NE62 594 aaPredicted RBP8.75□□□□□ -1.01
VAPB-201ENST00000265619 ACMSDQ8TDX5 336 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 FAR1Q8WVX9 515 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 GTF2H4Q92759 462 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 APBB2Q92870 758 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 SLC30A3Q99726 388 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 OSBPL2Q9H1P3 480 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 RPRD1BQ9NQG5 326 aaKnown RBP8.75□□□□□ -1.01
VAPB-201ENST00000265619 C14orf119Q9NWQ9 140 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 A0A096LPK6 155 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 A0A0G2JLL6 359 aaPredicted RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 SLC12A8A0AV02 714 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 RNF103O00237 685 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 INPP4BO15327 924 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 GABARAPO95166 117 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 C4BPAP04003 597 aaKnown RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 PGRP06401 933 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 TNNI1P19237 187 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 CYP3A5P20815 502 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 HCAR3P49019 387 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 OR2B6P58173 313 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 EMX1Q04741 257 aaPredicted RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 POU5F1BQ06416 359 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 COL19A1Q14993 1142 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 CA9Q16790 459 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 AGAP9Q5VTM2 703 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 LAIR1Q6GTX8 287 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 PRRT2Q7Z6L0 340 aaPredicted RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 FUNDC1Q8IVP5 155 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 TMEM161BQ8NDZ6 487 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 TOR1AIP2Q8NFQ8 470 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 OR5B17Q8NGF7 314 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 NPLOC4Q8TAT6 608 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 TOP1MTQ969P6 601 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 NXNL1Q96CM4 212 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 PIWIL1Q96J94 861 aaKnown RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 MYRFLQ96LU7 910 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 MCMBPQ9BTE3 642 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 RANGRFQ9HD47 186 aaPredicted RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 STMN3Q9NZ72 180 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 PAK5Q9P286 719 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 MAP10Q9P2G4 905 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 OPTCQ9UBM4 332 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 PDE4DIPQ5VU43 2346 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 NEMP2A6NFY4 417 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 SPATA31C2B4DYI2 1134 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 INO80B-WBP1J3KQ70 363 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 AKR7A2O43488 359 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 KCNJ13O60928 360 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 PCNAP12004 261 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 POU3F3P20264 500 aaPredicted RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 RRM2P31350 389 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 ADCYAP1R1P41586 468 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 STAT5BP51692 787 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 SNRPD2P62316 118 aaKnown RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 SLAMF1Q13291 335 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 SUZ12Q15022 739 aaKnown RBP8.74□□□□□ -1.01
VAPB-201ENST00000265619 CYP51A1Q16850 503 aa8.74□□□□□ -1.01
VAPB-201ENST00000265619 CDO1Q16878 200 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms