RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CLEC6AQ6EIG7 209 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 PRSS55Q6UWB4 352 aaPredicted RBP16.67■□□□□ 0.26
PHRF1-201ENST00000264555 ZMAT2Q96NC0 199 aaKnown RBP16.67■□□□□ 0.26
PHRF1-201ENST00000264555 ZNF599Q96NL3 588 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 TAS2R1Q9NYW7 299 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 MAGEL2Q9UJ55 1249 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 COL18A1P39060 1754 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 NRP1O14786 923 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 ARHGEF9O43307 516 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 MSX2P35548 267 aaPredicted RBP16.67■□□□□ 0.26
PHRF1-201ENST00000264555 CHRNA4P43681 627 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 ZNF33AQ06730 810 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 CYP20A1Q6UW02 462 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 TSEN34Q9BSV6 310 aaKnown RBP16.67■□□□□ 0.26
PHRF1-201ENST00000264555 SMOC2Q9H3U7 446 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 SLC22A2O15244 555 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 NTRK1P04629 796 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 ELFN1P0C7U0 828 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 NR1H2P55055 460 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 GALNT2Q10471 571 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 ABRAXAS1Q6UWZ7 409 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 RD3Q7Z3Z2 195 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 PROX1Q92786 737 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 CCDC3Q9BQI4 270 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 DDX28Q9NUL7 540 aaKnown RBP16.67■□□□□ 0.26
PHRF1-201ENST00000264555 SLC17A6Q9P2U8 582 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 PTGES3LE9PB15 166 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 LIN7AO14910 233 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-201ENST00000264555 PRAMEF1O95521 474 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 SP100P23497 879 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-201ENST00000264555 RFX3P48380 749 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 PWP1Q13610 501 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 DPYSQ14117 519 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 UNC5BQ8IZJ1 945 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 CLP1Q92989 425 aaKnown RBP16.66■□□□□ 0.26
PHRF1-201ENST00000264555 IL1BP01584 269 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 ESR1P03372 595 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 GNPDA1P46926 289 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 SLC16A1P53985 500 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 TOP3AQ13472 1001 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-201ENST00000264555 OXSMQ9NWU1 459 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 C3orf18Q9UK00 162 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 UROSP10746 265 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 PTGER3P43115 390 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 C1DQ13901 141 aaKnown RBP16.66■□□□□ 0.26
PHRF1-201ENST00000264555 KHDC1Q4VXA5 237 aaKnown RBP16.66■□□□□ 0.26
PHRF1-201ENST00000264555 MAMDC4Q6UXC1 1216 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 CSGALNACT1Q8TDX6 532 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 HAPLN2Q9GZV7 340 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 MCM8Q9UJA3 840 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 ABLIM1O14639 778 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 BMP10O95393 424 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 ADH1CP00326 375 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 POLR2JP52435 117 aaKnown RBP16.66■□□□□ 0.26
PHRF1-201ENST00000264555 MLLT6P55198 1093 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-201ENST00000264555 AP5B1Q2VPB7 878 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 ISLR2Q6UXK2 745 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 IFNLR1Q8IU57 520 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-201ENST00000264555 IGFLR1Q9H665 355 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 PNPLA3Q9NST1 481 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 DDX18Q9NVP1 670 aaKnown RBP16.66■□□□□ 0.26
PHRF1-201ENST00000264555 USE1Q9NZ43 259 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 TIMM22Q9Y584 194 aa16.66■□□□□ 0.26
PHRF1-201ENST00000264555 SMIM31A0A1B0GVY4 71 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 MAP3K13O43283 966 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 PRMT2P55345 433 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 IRF9Q00978 393 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 LPCAT4Q643R3 524 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 CASP12Q6UXS9 341 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 PANX1Q96RD7 426 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 UNC93B1Q9H1C4 597 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 SCML2Q9UQR0 700 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 RFXANKO14593 260 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 TBX18O95935 607 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 UGT2B4P06133 528 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 HSMCR30P0CW71 290 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 HOXB6P17509 224 aaKnown RBP16.65■□□□□ 0.26
PHRF1-201ENST00000264555 RPL17P18621 184 aaKnown RBP16.65■□□□□ 0.26
PHRF1-201ENST00000264555 ZCCHC8Q6NZY4 707 aaKnown RBP16.65■□□□□ 0.26
PHRF1-201ENST00000264555 MSANTD2Q6P1R3 559 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 TIFABQ6ZNK6 161 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 ZNF438Q7Z4V0 828 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 UBR7Q8N806 425 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 SIGLEC10Q96LC7 697 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 NDEL1Q9GZM8 345 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 ROGDIQ9GZN7 287 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 PCDH12Q9NPG4 1184 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 STK16O75716 305 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 ECHS1P30084 290 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 NCF4Q15080 339 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 INO80DQ53TQ3 878 aaPredicted RBP16.65■□□□□ 0.26
PHRF1-201ENST00000264555 TBC1D21Q8IYX1 336 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 MIEF2Q96C03 454 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 ZFYVE19Q96K21 471 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 EBF4Q9BQW3 602 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 ZNF490Q9ULM2 529 aaPredicted RBP16.65■□□□□ 0.26
PHRF1-201ENST00000264555 COL6A1P12109 1028 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 FAM46CQ5VWP2 391 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 FBXL22Q6P050 247 aa16.65■□□□□ 0.26
PHRF1-201ENST00000264555 B3GNT6Q6ZMB0 384 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms