RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 CAMK1DQ8IU85 385 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 SPPL2CQ8IUH8 684 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 FBXO30Q8TB52 745 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 SGIP1Q9BQI5 828 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 MRPL9Q9BYD2 267 aaKnown RBP12.53□□□□□ -0.4
HERC6-201ENST00000264346 ARL15Q9NXU5 204 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 EIF2B4Q9UI10 523 aaKnown RBP12.53□□□□□ -0.4
HERC6-201ENST00000264346 DOLKQ9UPQ8 538 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 FOCADQ5VW36 1801 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 SLC38A8A6NNN8 435 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 CNPP09543 421 aaKnown RBP12.53□□□□□ -0.4
HERC6-201ENST00000264346 VCLP18206 1134 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 GNAZP19086 355 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 SQLEQ14534 574 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 PARP15Q460N3 678 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 TRPV1Q8NER1 839 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 CAPNS2Q96L46 248 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 DCUN1D5Q9BTE7 237 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 KIFC1Q9BW19 673 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 CCDC106Q9BWC9 280 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 KATNBL1Q9H079 304 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 ELOVL6Q9H5J4 265 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 F5P12259 2224 aa12.53□□□□□ -0.4
HERC6-201ENST00000264346 CDC7O00311 574 aa12.52□□□□□ -0.4
HERC6-201ENST00000264346 TRIM38O00635 465 aa12.52□□□□□ -0.4
HERC6-201ENST00000264346 LRATO95237 230 aa12.52□□□□□ -0.4
HERC6-201ENST00000264346 CPSF4O95639 269 aaKnown RBP12.52□□□□□ -0.4
HERC6-201ENST00000264346 ATP5BP06576 529 aaKnown RBP12.52□□□□□ -0.4
HERC6-201ENST00000264346 PKMP14618 531 aaKnown RBP12.52□□□□□ -0.4
HERC6-201ENST00000264346 RPL38P63173 70 aaKnown RBP12.52□□□□□ -0.4
HERC6-201ENST00000264346 PHEXP78562 749 aa12.52□□□□□ -0.4
HERC6-201ENST00000264346 PFKPQ01813 784 aa12.52□□□□□ -0.4
HERC6-201ENST00000264346 TTLL9Q3SXZ7 439 aa12.52□□□□□ -0.4
HERC6-201ENST00000264346 TXNDC8Q6A555 127 aa12.52□□□□□ -0.4
HERC6-201ENST00000264346 OTOP2Q7RTS6 562 aa12.52□□□□□ -0.4
HERC6-201ENST00000264346 MAGEE2Q8TD90 523 aaPredicted RBP12.52□□□□□ -0.4
HERC6-201ENST00000264346 MED8Q96G25 268 aa12.52□□□□□ -0.4
HERC6-201ENST00000264346 OLFM1Q99784 485 aa12.52□□□□□ -0.4
HERC6-201ENST00000264346 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.52□□□□□ -0.4
HERC6-201ENST00000264346 RMI1Q9H9A7 625 aa12.52□□□□□ -0.4
HERC6-201ENST00000264346 PARVBQ9HBI1 364 aa12.52□□□□□ -0.4
HERC6-201ENST00000264346 RPL26L1Q9UNX3 145 aaKnown RBP12.52□□□□□ -0.4
HERC6-201ENST00000264346 GREB1LQ9C091 1923 aaPredicted RBP12.52□□□□□ -0.4
HERC6-201ENST00000264346 COL11A1P12107 1806 aaPredicted RBP12.52□□□□□ -0.4
HERC6-201ENST00000264346 A0A1W2PQ67 120 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 MATN2O00339 956 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 ZNF682O95780 498 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 FAM58BPP0C7Q3 252 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 COL6A2P12110 1019 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 NCK1P16333 377 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 AOC1P19801 751 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 IKBKEQ14164 716 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 METTL21CQ5VZV1 264 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 EPGNQ6UW88 154 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 STK32CQ86UX6 486 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 SH3KBP1Q96B97 665 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 CDKN2AIPNLQ96HQ2 116 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 HAUS8Q9BT25 410 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 OR4F21O95013 312 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 JUNP05412 331 aaKnown RBP12.52□□□□□ -0.41
HERC6-201ENST00000264346 HSPA1AP0DMV8 641 aaKnown RBP12.52□□□□□ -0.41
HERC6-201ENST00000264346 HSPA1BP0DMV9 641 aaKnown RBP12.52□□□□□ -0.41
HERC6-201ENST00000264346 FASP25445 335 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 MZF1P28698 734 aaPredicted RBP12.52□□□□□ -0.41
HERC6-201ENST00000264346 YBEYP58557 167 aaPredicted RBP12.52□□□□□ -0.41
HERC6-201ENST00000264346 TRAF2Q12933 501 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 STEAP4Q687X5 459 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 AFTPHQ6ULP2 937 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 SLC44A2Q8IWA5 706 aaPredicted RBP12.52□□□□□ -0.41
HERC6-201ENST00000264346 ANKRD27Q96NW4 1050 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 NSUN5Q96P11 429 aaKnown RBP12.52□□□□□ -0.41
HERC6-201ENST00000264346 C2orf49Q9BVC5 232 aaPredicted RBP12.52□□□□□ -0.41
HERC6-201ENST00000264346 DPY30Q9C005 99 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 HPS4Q9NQG7 708 aa12.52□□□□□ -0.41
HERC6-201ENST00000264346 EIF3LQ9Y262 564 aaKnown RBP12.52□□□□□ -0.41
HERC6-201ENST00000264346 ZNFX1Q9P2E3 1918 aaKnown RBP12.51□□□□□ -0.41
HERC6-201ENST00000264346 ARHGAP10A1A4S6 786 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 MTMR11A4FU01 709 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 INSIG1O15503 277 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 ALBP02768 609 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 CKMT2P17540 419 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 HSPA7P48741 367 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 NDST2P52849 883 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 IL10RBQ08334 325 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 SLC5A9Q2M3M2 681 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 ADCK2Q7Z695 626 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 NSMCE2Q96MF7 247 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 GALPQ9UBC7 116 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 LIMD1Q9UGP4 676 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 CD84Q9UIB8 345 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 PSMD13Q9UNM6 376 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 Q9Y3F1 56 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 SYNDIG1LA6NDD5 238 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 RAD51BO15315 384 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 SLC7A4O43246 635 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 EOMESO95936 686 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 TTPAP49638 278 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 CLCQ05315 142 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 LRRC74AQ0VAA2 488 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 DLG1Q12959 904 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms