RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 CKMP06732 381 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 RPL17P18621 184 aaKnown RBP16.25■□□□□ 0.19
CTCF-201ENST00000264010 GATMP50440 423 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 KCNK10P57789 538 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 RPS24P62847 133 aaKnown RBP16.25■□□□□ 0.19
CTCF-201ENST00000264010 IKBKEQ14164 716 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 TXNDC5Q8NBS9 432 aaKnown RBP16.25■□□□□ 0.19
CTCF-201ENST00000264010 PLD4Q96BZ4 506 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 ADNPQ9H2P0 1102 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 STK39Q9UEW8 545 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 KCTD3Q9Y597 815 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 CENPFP49454 3210 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 NUP205Q92621 2012 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 MAGEB3O15480 346 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 ADRA1AP35348 466 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 IL2P60568 153 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 MANEALQ5VSG8 457 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 ITIH5Q86UX2 942 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 CENPLQ8N0S6 344 aaPredicted RBP16.25■□□□□ 0.19
CTCF-201ENST00000264010 RIN3Q8TB24 985 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 TRPC4APQ8TEL6 797 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 ULK4Q96C45 1275 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 ZIC5Q96T25 663 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 NPAS2Q99743 824 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 PARVBQ9HBI1 364 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 ARNT2Q9HBZ2 717 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 OSER1Q9NX31 292 aa16.25■□□□□ 0.19
CTCF-201ENST00000264010 TRIM38O00635 465 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 HMOX2P30519 316 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 SLC26A3P40879 764 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 ARPC4P59998 168 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 SMAD3P84022 425 aaKnown RBP16.24■□□□□ 0.19
CTCF-201ENST00000264010 INPP5AQ14642 412 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 RFTN1Q14699 578 aaPredicted RBP16.24■□□□□ 0.19
CTCF-201ENST00000264010 BHLHE22Q8NFJ8 381 aaPredicted RBP16.24■□□□□ 0.19
CTCF-201ENST00000264010 OR13C4Q8NGS5 318 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 TREX1Q9NSU2 369 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 RAI2Q9Y5P3 530 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 A0A088AWK7 358 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 ATP6AP2A0A1C7CYW4 349 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 AZIN1O14977 448 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 VPS4BO75351 444 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 ATP6AP2O75787 350 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 IL10P22301 178 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 CTGFP29279 349 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 DENND5AQ6IQ26 1287 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 STK40Q8N2I9 435 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 MIER2Q8N344 545 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 CYGBQ8WWM9 190 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 MOCOSQ96EN8 888 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 ZNF558Q96NG5 402 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 CRLS1Q9UJA2 301 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 TBL1XO60907 577 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 GALTP07902 379 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 IMPDH1P20839 514 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 SAMD4BQ5PRF9 694 aaKnown RBP16.24■□□□□ 0.19
CTCF-201ENST00000264010 ARMC12Q5T9G4 340 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 LPCAT4Q643R3 524 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 GK5Q6ZS86 529 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 TCF12Q99081 682 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 HIPK3Q9H422 1215 aa16.24■□□□□ 0.19
CTCF-201ENST00000264010 C6orf203Q9P0P8 240 aaPredicted RBP16.24■□□□□ 0.19
CTCF-201ENST00000264010 HNRNPCL2B2RXH8 293 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 DLGAP3O95886 979 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 LBPP18428 481 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 ITGALP20701 1170 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 RECQLP46063 649 aaPredicted RBP16.23■□□□□ 0.19
CTCF-201ENST00000264010 ARCN1P48444 511 aaKnown RBP16.23■□□□□ 0.19
CTCF-201ENST00000264010 HSPA13P48723 471 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 GPSM1Q86YR5 675 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 MAPK15Q8TD08 544 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 PKMYT1Q99640 499 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 INTS10Q9NVR2 710 aaKnown RBP16.23■□□□□ 0.19
CTCF-201ENST00000264010 PSMD13Q9UNM6 376 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 TMEM233B4DJY2 109 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 XPAP23025 273 aaPredicted RBP16.23■□□□□ 0.19
CTCF-201ENST00000264010 EML3Q32P44 896 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 PABPC1LQ4VXU2 614 aaKnown RBP16.23■□□□□ 0.19
CTCF-201ENST00000264010 TECRLQ5HYJ1 363 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 THOC7Q6I9Y2 204 aaKnown RBP16.23■□□□□ 0.19
CTCF-201ENST00000264010 CCDC103Q8IW40 242 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 PHC3Q8NDX5 983 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 OR56A4Q8NGH8 313 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 CDKN2AIPNLQ96HQ2 116 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 PRDM5Q9NQX1 630 aaPredicted RBP16.23■□□□□ 0.19
CTCF-201ENST00000264010 PPM1HQ9ULR3 514 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 ZBTB14O43829 449 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 GABRB3P28472 473 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 MC4RP32245 332 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 XIAPP98170 497 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 RTN4RL1Q86UN2 441 aaPredicted RBP16.23■□□□□ 0.19
CTCF-201ENST00000264010 HJURPQ8NCD3 748 aaPredicted RBP16.23■□□□□ 0.19
CTCF-201ENST00000264010 PEX13Q92968 403 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 BPIFA1Q9NP55 256 aa16.23■□□□□ 0.19
CTCF-201ENST00000264010 SEMA4BQ9NPR2 832 aaPredicted RBP16.23■□□□□ 0.19
CTCF-201ENST00000264010 ILVBLA1L0T0 632 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 CACNG3O60359 315 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 FKTNO75072 461 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 CSPG5O95196 566 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 ESRRBO95718 433 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms