RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 SNX20Q7Z614 316 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 RALGPS2Q86X27 583 aaPredicted RBP22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 ZNF513Q8N8E2 541 aaPredicted RBP22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 PLEKHG4BQ96PX9 1271 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 AARSD1Q9BTE6 412 aaKnown RBP22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 TMEM216Q9P0N5 145 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 ACOT9Q9Y305 439 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 EYSQ5T1H1 3165 aa22.79■■□□□ 1.24
SMARCB1-201ENST00000263121 WISP3O95389 354 aaPredicted RBP22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 TAC1P20366 129 aa22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 ITGALP20701 1170 aa22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 FDXRP22570 491 aa22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 XPAP23025 273 aaPredicted RBP22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 MMP12P39900 470 aa22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 SPINT3P49223 89 aa22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 CDKN2DP55273 166 aa22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 NFATC2Q13469 925 aa22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 ZDHHC20Q5W0Z9 365 aa22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 C16orf46Q6P387 395 aa22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 CERS6Q6ZMG9 384 aa22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 Q7L0L9 218 aa22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 DSG4Q86SJ6 1040 aa22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 CENPLQ8N0S6 344 aaPredicted RBP22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.78■■□□□ 1.242e-10■■■■■ 34
SMARCB1-201ENST00000263121 C8orf33Q9H7E9 229 aaPredicted RBP22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 ZNF358Q9NW07 568 aa22.78■■□□□ 1.24
SMARCB1-201ENST00000263121 A0A087X1B8 175 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 TCP11X1B4DZS4 312 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 PROCP04070 461 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 ADARP55265 1226 aaKnown RBP22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 TIAL1Q01085 375 aaKnown RBP eCLIP22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 SMAD2Q15796 467 aaKnown RBP22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 CHRNA6Q15825 494 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 RFLNAQ6ZTI6 216 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 TAS2R42Q7RTR8 314 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 CHPFQ8IZ52 775 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 HLA-CQ95604 372 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 PPP1R16AQ96I34 528 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 RABEP2Q9H5N1 569 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 ASB8Q9H765 288 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 PKD2L2Q9NZM6 624 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 PIAS3Q9Y6X2 628 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 UBA6A0AVT1 1052 aaPredicted RBP22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 AGAP14A8MT82 685 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 SPINT1O43278 529 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 IL1BP01584 269 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 CA5AP35218 305 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 PTGER3P43115 390 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 SUOXP51687 545 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 CAMK2GQ13555 558 aaPredicted RBP22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 CCDC153Q494R4 210 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 GPR33Q49SQ1 333 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 ERAP2Q6P179 960 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 CCDC91Q7Z6B0 441 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 LRRC34Q8IZ02 419 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 BIRC8Q96P09 236 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 CCT8L2Q96SF2 557 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 HEBP1Q9NRV9 189 aa22.77■■□□□ 1.24
SMARCB1-201ENST00000263121 CKAP5Q14008 2032 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 WDR91A4D1P6 747 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 C1QTNF3-AMACRE9PGA6 284 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 FAM107AO95990 144 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 DRD4P21917 467 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 FMO4P31512 558 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 DBN1Q16643 649 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 TMEM196Q5HYL7 178 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 PRPF38BQ5VTL8 546 aaKnown RBP22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 HSD11B1LQ7Z5J1 315 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 SERPINA9Q86WD7 417 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 MMAAQ8IVH4 418 aaKnown RBP22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 ZNF398Q8TD17 642 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 BCAS4Q8TDM0 211 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 KCTD4Q8WVF5 259 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 GUCD1Q96NT3 240 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 POPDC3Q9HBV1 291 aa22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 NFKBIL1Q9UBC1 381 aaPredicted RBP22.76■■□□□ 1.23
SMARCB1-201ENST00000263121 BIRC5O15392 142 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 OR1I1O60431 355 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 FOSL2P15408 326 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 TIE1P35590 1138 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 WASP42768 502 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 SEC13P55735 322 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 DCDC1P59894 354 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 DLG1Q12959 904 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 LYPLAL1Q5VWZ2 237 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 GPR153Q6NV75 609 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 PPM1EQ8WY54 764 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 ZNF75CPQ92670 426 aaPredicted RBP22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 GPR78Q96P69 363 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 P2RY12Q9H244 342 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 MED16Q9Y2X0 877 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 UNC80Q8N2C7 3258 aa22.75■■□□□ 1.23
SMARCB1-201ENST00000263121 AREL1O15033 823 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 KLHL2O95198 593 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 EGFP01133 1207 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 ASGR2P07307 311 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 BPGMP07738 259 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 VIMP08670 466 aaKnown RBP22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 ADRB3P13945 408 aa22.74■■□□□ 1.23
SMARCB1-201ENST00000263121 PKMP14618 531 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms