RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 PTPN5P54829 565 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 DPTQ07507 201 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 FRG1Q14331 258 aaKnown RBP15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 CHRNA6Q15825 494 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 UAP1Q16222 522 aaPredicted RBP15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 ZNF528Q3MIS6 628 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 AFTPHQ6ULP2 937 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 SLC36A4Q6YBV0 504 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 KDM7AQ6ZMT4 941 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 KCNMB4Q86W47 210 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 PNPLA1Q8N8W4 532 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 PLA2G15Q8NCC3 412 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 CADM4Q8NFZ8 388 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 ASB12Q8WXK4 309 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 CENPTQ96BT3 561 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 SPATA16Q9BXB7 569 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 FAM126AQ9BYI3 521 aaPredicted RBP15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 FZD3Q9NPG1 666 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 MBNL1Q9NR56 388 aaKnown RBP15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 PLXNA2O75051 1894 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 CUL9Q8IWT3 2517 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 ABCA7Q8IZY2 2146 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 METTL12A8MUP2 240 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 FADS2P1A8MWK0 482 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 MAP3K13O43283 966 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 UGT1A9O60656 530 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 SPAG6O75602 509 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 PIAS1O75925 651 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 C1QAP02745 245 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 TSHRP16473 764 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 UGT1A6P19224 532 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 UGT1A1P22309 533 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 UGT1A4P22310 534 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 FOXN2P32314 431 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 UGT1A3P35503 534 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 UGT1A5P35504 534 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 CDKN1CP49918 316 aaPredicted RBP15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 LRRC14Q15048 493 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 IRF4Q15306 451 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 ATP13A5Q4VNC0 1218 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 PDPK2PQ6A1A2 396 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 SLC41A1Q8IVJ1 513 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 TMEFF1Q8IYR6 380 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 TRAM1L1Q8N609 369 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 OR4L1Q8NH43 312 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 UHMK1Q8TAS1 419 aaKnown RBP15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 FBF1Q8TES7 1133 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 UBLCP1Q8WVY7 318 aaPredicted RBP15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 GAB3Q8WWW8 586 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 MYOCQ99972 504 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 PCED1AQ9H1Q7 454 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 FAM96AQ9H5X1 160 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 UGT1A7Q9HAW7 530 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 UGT1A10Q9HAW8 530 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 UGT1A8Q9HAW9 530 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 MARCH4Q9P2E8 410 aaPredicted RBP15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 SLC30A1Q9Y6M5 507 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 ZNF318Q5VUA4 2279 aa15.72■□□□□ 0.11
CCDC90B-201ENST00000260054 HRO43593 1189 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 GALR2O43603 387 aaPredicted RBP15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 PCCBP05166 539 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 H2AFXP16104 143 aaPredicted RBP15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 IGFALSP35858 605 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 HSD17B3P37058 310 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 NFATC2Q13469 925 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 SLC29A2Q14542 456 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 SEMA3AQ14563 771 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 SETMARQ53H47 684 aaPredicted RBP15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 HSP90AA5PQ58FG0 334 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 ZRANB3Q5FWF4 1079 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 BEND6Q5SZJ8 279 aaPredicted RBP15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 PSAPL1Q6NUJ1 521 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 CYS1Q717R9 158 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 NLRP8Q86W28 1048 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 PIANPQ8IYJ0 282 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 MREGQ8N565 214 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 ZNF398Q8TD17 642 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 DTX3LQ8TDB6 740 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 HNRNPLLQ8WVV9 542 aaKnown RBP15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 SGSM3Q96HU1 749 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 LENG8Q96PV6 779 aaPredicted RBP15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 ORAI3Q9BRQ5 295 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 ZSCAN5AQ9BUG6 496 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 C1QTNF1Q9BXJ1 281 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 C1QTNF7Q9BXJ2 289 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 FUT8Q9BYC5 575 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 ASB8Q9H765 288 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 PPANQ9NQ55 473 aaKnown RBP15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 SMYD2Q9NRG4 433 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 ZSCAN32Q9NX65 697 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 KCTD5Q9NXV2 234 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 SLC17A6Q9P2U8 582 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 TMPRSS11EQ9UL52 423 aa15.71■□□□□ 0.11
CCDC90B-201ENST00000260054 A0A1W2PPC4 97 aa15.7■□□□□ 0.1
CCDC90B-201ENST00000260054 F7P08709 466 aaPredicted RBP15.7■□□□□ 0.1
CCDC90B-201ENST00000260054 HNRNPA2B1P22626 353 aaKnown RBP15.7■□□□□ 0.1
CCDC90B-201ENST00000260054 STX2P32856 288 aa15.7■□□□□ 0.1
CCDC90B-201ENST00000260054 PHBP35232 272 aa15.7■□□□□ 0.1
CCDC90B-201ENST00000260054 CACNG1Q06432 222 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms