RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 TYRP14679 529 aa27.56■■■□□ 2
CCM2-201ENST00000258781 ZNF37AP17032 561 aaPredicted RBP27.56■■■□□ 2
CCM2-201ENST00000258781 TFEBP19484 476 aa27.56■■■□□ 2
CCM2-201ENST00000258781 XIAPP98170 497 aa27.56■■■□□ 2
CCM2-201ENST00000258781 PDAP1Q13442 181 aaKnown RBP27.56■■■□□ 2
CCM2-201ENST00000258781 ARL13AQ5H913 290 aaPredicted RBP27.56■■■□□ 2
CCM2-201ENST00000258781 PSAPL1Q6NUJ1 521 aa27.56■■■□□ 2
CCM2-201ENST00000258781 PIANPQ8IYJ0 282 aa27.56■■■□□ 2
CCM2-201ENST00000258781 RYBPQ8N488 228 aaPredicted RBP27.56■■■□□ 2
CCM2-201ENST00000258781 PCDH20Q8N6Y1 951 aaKnown RBP27.56■■■□□ 2
CCM2-201ENST00000258781 ASB16Q96NS5 453 aa27.56■■■□□ 2
CCM2-201ENST00000258781 S1PR5Q9H228 398 aa27.56■■■□□ 2
CCM2-201ENST00000258781 CLDND1Q9NY35 253 aa27.56■■■□□ 2
CCM2-201ENST00000258781 TAS2R13Q9NYV9 303 aa27.56■■■□□ 2
CCM2-201ENST00000258781 NCKIPSDQ9NZQ3 722 aa27.56■■■□□ 2
CCM2-201ENST00000258781 EPB41L3Q9Y2J2 1087 aaPredicted RBP27.56■■■□□ 2
CCM2-201ENST00000258781 WNT6Q9Y6F9 365 aa27.56■■■□□ 2
CCM2-201ENST00000258781 TMEM265A0A087WTH1 108 aa27.55■■■□□ 2
CCM2-201ENST00000258781 RHOBTB1O94844 696 aa27.55■■■□□ 2
CCM2-201ENST00000258781 CD9P21926 228 aa27.55■■■□□ 2
CCM2-201ENST00000258781 LTBRP36941 435 aa27.55■■■□□ 2
CCM2-201ENST00000258781 ELF3P78545 371 aaPredicted RBP27.55■■■□□ 2
CCM2-201ENST00000258781 CACNG1Q06432 222 aa27.55■■■□□ 2
CCM2-201ENST00000258781 MYLK3Q32MK0 819 aa27.55■■■□□ 2
CCM2-201ENST00000258781 TTC31Q49AM3 519 aaPredicted RBP27.55■■■□□ 2
CCM2-201ENST00000258781 ZRANB3Q5FWF4 1079 aa27.55■■■□□ 2
CCM2-201ENST00000258781 CYB5D1Q6P9G0 228 aa27.55■■■□□ 2
CCM2-201ENST00000258781 SLC22A9Q8IVM8 553 aa27.55■■■□□ 2
CCM2-201ENST00000258781 CELF5Q8N6W0 485 aaKnown RBP27.55■■■□□ 2
CCM2-201ENST00000258781 SGF29Q96ES7 293 aa27.55■■■□□ 2
CCM2-201ENST00000258781 FAM161BQ96MY7 647 aa27.55■■■□□ 2
CCM2-201ENST00000258781 RAB3IPQ96QF0 476 aaPredicted RBP27.55■■■□□ 2
CCM2-201ENST00000258781 SLC2A11Q9BYW1 496 aa27.55■■■□□ 2
CCM2-201ENST00000258781 SYTL2Q9HCH5 934 aa27.55■■■□□ 2
CCM2-201ENST00000258781 COMMD10Q9Y6G5 202 aa27.55■■■□□ 2
CCM2-201ENST00000258781 DENND4AQ7Z401 1863 aa27.55■■■□□ 2
CCM2-201ENST00000258781 CAPN8A6NHC0 703 aa27.55■■■□□ 2
CCM2-201ENST00000258781 CAPN14A8MX76 684 aa27.55■■■□□ 2
CCM2-201ENST00000258781 CHRNGP07510 517 aa27.55■■■□□ 2
CCM2-201ENST00000258781 CD1DP15813 335 aa27.55■■■□□ 2
CCM2-201ENST00000258781 CALB2P22676 271 aa27.55■■■□□ 2
CCM2-201ENST00000258781 PTPN4P29074 926 aa27.55■■■□□ 2
CCM2-201ENST00000258781 WEE1P30291 646 aa27.55■■■□□ 2
CCM2-201ENST00000258781 FMO4P31512 558 aa27.55■■■□□ 2
CCM2-201ENST00000258781 CFAP157Q5JU67 520 aa27.55■■■□□ 2
CCM2-201ENST00000258781 LY6G5CQ5SRR4 150 aa27.55■■■□□ 2
CCM2-201ENST00000258781 EP400NLQ6ZTU2 488 aa27.55■■■□□ 2
CCM2-201ENST00000258781 ISCA2Q86U28 154 aa27.55■■■□□ 2
CCM2-201ENST00000258781 KIAA1958Q8N8K9 716 aa27.55■■■□□ 2
CCM2-201ENST00000258781 STON2Q8WXE9 905 aa27.55■■■□□ 2
CCM2-201ENST00000258781 EID2BQ96D98 161 aa27.55■■■□□ 2
CCM2-201ENST00000258781 CPEB1Q9BZB8 566 aaKnown RBP27.55■■■□□ 2
CCM2-201ENST00000258781 A8MT66 165 aa27.54■■■□□ 2
CCM2-201ENST00000258781 IPO13O94829 963 aaKnown RBP27.54■■■□□ 2
CCM2-201ENST00000258781 MPSTP25325 297 aa27.54■■■□□ 2
CCM2-201ENST00000258781 GKP32189 559 aa27.54■■■□□ 2
CCM2-201ENST00000258781 CDKN1CP49918 316 aaPredicted RBP27.54■■■□□ 2
CCM2-201ENST00000258781 RPL14P50914 215 aaKnown RBP27.54■■■□□ 2
CCM2-201ENST00000258781 ADARP55265 1226 aaKnown RBP27.54■■■□□ 2
CCM2-201ENST00000258781 EPGNQ6UW88 154 aa27.54■■■□□ 2
CCM2-201ENST00000258781 TRIM67Q6ZTA4 783 aa27.54■■■□□ 2
CCM2-201ENST00000258781 KIAA0907Q7Z7F0 614 aaPredicted RBP27.54■■■□□ 2
CCM2-201ENST00000258781 LSMEM2Q8N112 164 aa27.54■■■□□ 2
CCM2-201ENST00000258781 STK40Q8N2I9 435 aa27.54■■■□□ 2
CCM2-201ENST00000258781 PAF1Q8N7H5 531 aa27.54■■■□□ 2
CCM2-201ENST00000258781 CNDP1Q96KN2 507 aa27.54■■■□□ 2
CCM2-201ENST00000258781 ZFYVE1Q9HBF4 777 aa27.54■■■□□ 2
CCM2-201ENST00000258781 SLC30A1Q9Y6M5 507 aa27.54■■■□□ 2
CCM2-201ENST00000258781 SLCO1B7G3V0H7 640 aa27.53■■■□□ 2
CCM2-201ENST00000258781 ECT2LQ008S8 904 aa27.53■■■□□ 2
CCM2-201ENST00000258781 PTPRNQ16849 979 aa27.53■■■□□ 2
CCM2-201ENST00000258781 ADGRG2Q8IZP9 1017 aa27.53■■■□□ 2
CCM2-201ENST00000258781 CCNYL1Q8N7R7 359 aa27.53■■■□□ 2
CCM2-201ENST00000258781 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.53■■■□□ 22e-6■■■■■ 54.9
CCM2-201ENST00000258781 VOPP1Q96AW1 172 aa27.53■■■□□ 2
CCM2-201ENST00000258781 BIRC8Q96P09 236 aa27.53■■■□□ 2
CCM2-201ENST00000258781 ALG9Q9H6U8 611 aa27.53■■■□□ 2
CCM2-201ENST00000258781 COG4Q9H9E3 785 aa27.53■■■□□ 2
CCM2-201ENST00000258781 ARMCX1Q9P291 453 aa27.53■■■□□ 2
CCM2-201ENST00000258781 VTI1BQ9UEU0 232 aa27.53■■■□□ 2
CCM2-201ENST00000258781 MED16Q9Y2X0 877 aa27.53■■■□□ 2
CCM2-201ENST00000258781 OAS3Q9Y6K5 1087 aaKnown RBP27.53■■■□□ 2
CCM2-201ENST00000258781 MATN2O00339 956 aa27.53■■■□□ 2
CCM2-201ENST00000258781 PYGLP06737 847 aa27.53■■■□□ 2
CCM2-201ENST00000258781 KRT16P08779 473 aa27.53■■■□□ 2
CCM2-201ENST00000258781 PKMP14618 531 aaKnown RBP27.53■■■□□ 2
CCM2-201ENST00000258781 IGFBP4P22692 258 aa27.53■■■□□ 2
CCM2-201ENST00000258781 PTGER3P43115 390 aa27.53■■■□□ 2
CCM2-201ENST00000258781 CDKN3Q16667 212 aa27.53■■■□□ 2
CCM2-201ENST00000258781 SMARCD2Q92925 531 aa27.53■■■□□ 2
CCM2-201ENST00000258781 ECHDC3Q96DC8 303 aa27.53■■■□□ 2
CCM2-201ENST00000258781 LYSMD1Q96S90 227 aa27.53■■■□□ 2
CCM2-201ENST00000258781 CCDC106Q9BWC9 280 aa27.53■■■□□ 2
CCM2-201ENST00000258781 KLC4Q9NSK0 619 aa27.53■■■□□ 2
CCM2-201ENST00000258781 GDE1Q9NZC3 331 aa27.53■■■□□ 2
CCM2-201ENST00000258781 MTF2Q9Y483 593 aaPredicted RBP27.53■■■□□ 2
CCM2-201ENST00000258781 C1orf232A0A0U1RR37 186 aa27.52■■■□□ 2
CCM2-201ENST00000258781 NEMP2A6NFY4 417 aa27.52■■■□□ 2
CCM2-201ENST00000258781 POU3F3P20264 500 aaPredicted RBP27.52■■■□□ 2
CCM2-201ENST00000258781 HNF1BP35680 557 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms