RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 RMND5BQ96G75 393 aaPredicted RBP15.19■□□□□ 0.02
DDX56-201ENST00000258772 CMTM6Q9NX76 183 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 EGFL7Q9UHF1 273 aa15.19■□□□□ 0.02
DDX56-201ENST00000258772 A0A1B0GTL3 188 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 HMBSP08397 361 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 YBEYP58557 167 aaPredicted RBP15.18■□□□□ 0.02
DDX56-201ENST00000258772 CAPRIN1Q14444 709 aaKnown RBP15.18■□□□□ 0.02
DDX56-201ENST00000258772 RPS6KA2Q15349 733 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 TBCELQ5QJ74 424 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 STAG3L4Q8TBR4 150 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 KIAA1191Q96A73 305 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 TMIGD2Q96BF3 282 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 LRRC58Q96CX6 371 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 CDKN2AIPNLQ96HQ2 116 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 SLC52A3Q9NQ40 469 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 GID8Q9NWU2 228 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 IL37Q9NZH6 218 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 POLG2Q9UHN1 485 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 RIMKLBQ9ULI2 386 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 AURKCQ9UQB9 309 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 BTRCQ9Y297 605 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 ZFC3H1O60293 1989 aaKnown RBP15.18■□□□□ 0.02
DDX56-201ENST00000258772 ANKRD36A6QL64 1941 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 GBF1Q92538 1859 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 DHRS12A0PJE2 317 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 SAC3D1A6NKF1 404 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 INPPL1O15357 1258 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 PRAMEF11O60813 436 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 PRSS56P0CW18 603 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 CHRM3P20309 590 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 EEF1DP29692 281 aaKnown RBP15.18■□□□□ 0.02
DDX56-201ENST00000258772 BNIP2Q12982 314 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 ZNF235Q14590 738 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 INPP5AQ14642 412 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 LCN8Q6JVE9 175 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 BLOC1S3Q6QNY0 202 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.18■□□□□ 0.02
DDX56-201ENST00000258772 CYP2S1Q96SQ9 504 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 TRIM15Q9C019 465 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 SYTL2Q9HCH5 934 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.18■□□□□ 0.02
DDX56-201ENST00000258772 MARCH2Q9P0N8 246 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 ACTR3BQ9P1U1 418 aa15.18■□□□□ 0.02
DDX56-201ENST00000258772 PDLIM1O00151 329 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 KERAO60938 352 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 TRMUO75648 421 aaKnown RBP15.17■□□□□ 0.02
DDX56-201ENST00000258772 IDO1P14902 403 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 IL10P22301 178 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 LCP2Q13094 533 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 TYSND1Q2T9J0 566 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 SETMARQ53H47 684 aaPredicted RBP15.17■□□□□ 0.02
DDX56-201ENST00000258772 INTS11Q5TA45 600 aaKnown RBP15.17■□□□□ 0.02
DDX56-201ENST00000258772 PAQR3Q6TCH7 311 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 CAMK1DQ8IU85 385 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 FBXO39Q8N4B4 442 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 CBR4Q8N4T8 237 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 TTC9BQ8N6N2 239 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 PACRGLQ8N7B6 248 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 MFSD2AQ8NA29 543 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 GOLM1Q8NBJ4 401 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 KLHDC9Q8NEP7 349 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 EZH1Q92800 747 aaPredicted RBP15.17■□□□□ 0.02
DDX56-201ENST00000258772 MYEOVQ96EZ4 313 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 CLK4Q9HAZ1 481 aaKnown RBP15.17■□□□□ 0.02
DDX56-201ENST00000258772 SPC25Q9HBM1 224 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 AGPAT4Q9NRZ5 378 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 HSFX1Q9UBD0 423 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 TMCO1Q9UM00 188 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 MED16Q9Y2X0 877 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 PCDHB5Q9Y5E4 795 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 GREB1Q4ZG55 1949 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 SLC12A8A0AV02 714 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 UBA6A0AVT1 1052 aaPredicted RBP15.17■□□□□ 0.02
DDX56-201ENST00000258772 FAM92AA1XBS5 289 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 SUPT3HB4E1H0 165 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 DLGAP1O14490 977 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 VPS4BO75351 444 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 SUPT3HO75486 399 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 RHOBTB1O94844 696 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 SERPINF2P08697 491 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 UGT1A6P19224 532 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 DIO3P55073 304 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 TUBA4AP68366 448 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 ECT2LQ008S8 904 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 COQ5Q5HYK3 327 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 C10orf120Q5SQS8 335 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 FIBCD1Q8N539 461 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 FAM47BQ8NA70 645 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 ATAD1Q8NBU5 361 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 HM13Q8TCT9 377 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 FBXO32Q969P5 355 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 SLC45A3Q96JT2 553 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 DERL2Q9GZP9 239 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 SEMA4BQ9NPR2 832 aaPredicted RBP15.17■□□□□ 0.02
DDX56-201ENST00000258772 INTS10Q9NVR2 710 aaKnown RBP15.17■□□□□ 0.02
DDX56-201ENST00000258772 RSL24D1Q9UHA3 163 aaKnown RBP15.17■□□□□ 0.02
DDX56-201ENST00000258772 IKZF3Q9UKT9 509 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 RNF112Q9ULX5 631 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 SLC8A2Q9UPR5 921 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 FAM50BQ9Y247 325 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms