RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 TMEM63CQ9P1W3 806 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 PHTF1Q9UMS5 762 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 SUFUQ9UMX1 484 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 PCDHGA3Q9Y5H0 932 aa10.28□□□□□ -0.76
VPS50-201ENST00000251739 SPENQ96T58 3664 aaKnown RBP10.28□□□□□ -0.76
VPS50-201ENST00000251739 USP9YO00507 2555 aaPredicted RBP10.27□□□□□ -0.76
VPS50-201ENST00000251739 IGHV5-10-1A0A0J9YXX1 117 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 J3QL48 77 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 ECEL1O95672 775 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 PDHA1P08559 390 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 CYP2A6P11509 494 aaPredicted RBP10.27□□□□□ -0.77
VPS50-201ENST00000251739 CCL4P13236 92 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 ITGB6P18564 788 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 IL4RP24394 825 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 NFKBIAP25963 317 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 SERPINB6P35237 376 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 ADCY8P40145 1251 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 GNPDA1P46926 289 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 POLD2P49005 469 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 ARSEP51690 589 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 MAXP61244 160 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 MAP9Q49MG5 647 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 PHF19Q5T6S3 580 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 RFLNAQ6ZTI6 216 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 USP45Q70EL2 814 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 VASH2Q86V25 355 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 PIM3Q86V86 326 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 NLRP8Q86W28 1048 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 LRRC49Q8IUZ0 686 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 PAF1Q8N7H5 531 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 HTR3CQ8WXA8 447 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 MAML1Q92585 1016 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 FATE1Q969F0 183 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 COX14Q96I36 57 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 NAP1L5Q96NT1 182 aaPredicted RBP10.27□□□□□ -0.77
VPS50-201ENST00000251739 SMIM14Q96QK8 99 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 STARD5Q9NSY2 213 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 PDP2Q9P2J9 529 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 RCOR3Q9P2K3 495 aaPredicted RBP10.27□□□□□ -0.77
VPS50-201ENST00000251739 MYO1AQ9UBC5 1043 aa10.27□□□□□ -0.77
VPS50-201ENST00000251739 IGHV1OR21-1A0A087WYE8 117 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 A0A0J9YYE9 177 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 A0A0U1RQS6 177 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 PPM1DO15297 605 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 MFSD11O43934 449 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 PRLP01236 227 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 TRBC1P01850 177 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 THRAP10827 490 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 FGF3P11487 239 aaPredicted RBP10.26□□□□□ -0.77
VPS50-201ENST00000251739 SKILP12757 684 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 KRT10P13645 584 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 ZNF30P17039 623 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 PBX1P40424 430 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 FASLGP48023 281 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 STC1P52823 247 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 LIMK2P53671 638 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 MAPK10P53779 464 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 GALNT2Q10471 571 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 TRA2AQ13595 282 aaKnown RBP eCLIP10.26□□□□□ -0.77
VPS50-201ENST00000251739 PIGHQ14442 188 aaPredicted RBP10.26□□□□□ -0.77
VPS50-201ENST00000251739 NR1I3Q14994 352 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 IQCB1Q15051 598 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 ARMC12Q5T9G4 340 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 MARC1Q5VT66 337 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 LRRC66Q68CR7 880 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 RAET1GQ6H3X3 334 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 SLC30A9Q6PML9 568 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 USP53Q70EK8 1073 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 RAVER1Q8IY67 606 aaKnown RBP10.26□□□□□ -0.77
VPS50-201ENST00000251739 BBS5Q8N3I7 341 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 RCBTB1Q8NDN9 531 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 OR4D9Q8NGE8 314 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 PDCD6IPQ8WUM4 868 aaKnown RBP10.26□□□□□ -0.77
VPS50-201ENST00000251739 HSPH1Q92598 858 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 EXTL1Q92935 676 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 SCAMP4Q969E2 229 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 CCDC74BQ96LY2 380 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 OR2M4Q96R27 311 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 SEMA3CQ99985 751 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 FUCA2Q9BTY2 467 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 NAT10Q9H0A0 1025 aaKnown RBP10.26□□□□□ -0.77
VPS50-201ENST00000251739 CDH19Q9H159 772 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 ABCG8Q9H221 673 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 MOSPD1Q9UJG1 213 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 NENFQ9UMX5 172 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 PLEKHM1Q9Y4G2 1056 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 RELNP78509 3460 aa10.26□□□□□ -0.77
VPS50-201ENST00000251739 A0A1W2PQJ5 194 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 RHPN2P1A8MT19 583 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 TERTO14746 1132 aaKnown RBP10.25□□□□□ -0.77
VPS50-201ENST00000251739 SLC28A2O43868 658 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 CYP1A2P05177 515 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 CD48P09326 243 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 CTPS1P17812 591 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 ALDH4A1P30038 563 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 GARSP41250 739 aaKnown RBP10.25□□□□□ -0.77
VPS50-201ENST00000251739 ACTR1BP42025 376 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 ACTR1AP61163 376 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 PTSQ03393 145 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 LRP8Q14114 963 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms