RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 DEKP35659 375 aaKnown RBP20.95■□□□□ 0.94
NEDD8-201ENST00000250495 ETV5P41161 510 aa20.95■□□□□ 0.94
NEDD8-201ENST00000250495 STC1P52823 247 aa20.95■□□□□ 0.94
NEDD8-201ENST00000250495 PYCR3Q53H96 274 aa20.95■□□□□ 0.94
NEDD8-201ENST00000250495 ZFYVE27Q5T4F4 411 aa20.95■□□□□ 0.94
NEDD8-201ENST00000250495 CTNNBL1Q8WYA6 563 aaPredicted RBP20.95■□□□□ 0.94
NEDD8-201ENST00000250495 MED8Q96G25 268 aa20.95■□□□□ 0.94
NEDD8-201ENST00000250495 NENFQ9UMX5 172 aa20.95■□□□□ 0.94
NEDD8-201ENST00000250495 PPM1DO15297 605 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 TPM3P06753 285 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 CD1CP29017 333 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 HNRNPH3P31942 346 aaKnown RBP20.94■□□□□ 0.94
NEDD8-201ENST00000250495 SQSTM1Q13501 440 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 TRA2AQ13595 282 aaKnown RBP eCLIP20.94■□□□□ 0.94
NEDD8-201ENST00000250495 LRP8Q14114 963 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 C16orf72Q14CZ0 275 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 ZNF574Q6ZN55 896 aaPredicted RBP20.94■□□□□ 0.94
NEDD8-201ENST00000250495 GALNT13Q8IUC8 556 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 CCNYQ8ND76 341 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 ARRDC2Q8TBH0 407 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 PATE1Q8WXA2 126 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 FAF2Q96CS3 445 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 SMIM14Q96QK8 99 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 LYSMD1Q96S90 227 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 DPYSL5Q9BPU6 564 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 NUDT22Q9BRQ3 303 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 RIOK2Q9BVS4 552 aaKnown RBP20.94■□□□□ 0.94
NEDD8-201ENST00000250495 PCDH9Q9HC56 1237 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 PLEKHM1Q9Y4G2 1056 aa20.94■□□□□ 0.94
NEDD8-201ENST00000250495 CLDN7O95471 211 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 ASMTLO95671 621 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 PRLP01236 227 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 LIMK2P53671 638 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 TAS2R40P59535 323 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 IHHQ14623 411 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 SLC18A3Q16572 532 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 MANEAQ5SRI9 462 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 MARK2Q7KZI7 788 aaKnown RBP20.93■□□□□ 0.94
NEDD8-201ENST00000250495 ZFAND4Q86XD8 727 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 CCDC13Q8IYE1 715 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 HDAC11Q96DB2 347 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 SGF29Q96ES7 293 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 COX14Q96I36 57 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 ZNF830Q96NB3 372 aaPredicted RBP20.93■□□□□ 0.94
NEDD8-201ENST00000250495 AGAP2Q99490 1192 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 SEMA4CQ9C0C4 833 aa20.93■□□□□ 0.94
NEDD8-201ENST00000250495 IGHV5-10-1A0A0J9YXX1 117 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 C9orf172C9J069 976 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 HLA-DQB2P05538 268 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 KDELR1P24390 212 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 GBE1Q04446 702 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 NIPAL4Q0D2K0 466 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 XKR5Q6UX68 686 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 TRIM74Q86UV6 250 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 DTX1Q86Y01 620 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 CPNE8Q86YQ8 564 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 PQLC3Q8N755 202 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 ZSCAN1Q8NBB4 408 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 LPCAT1Q8NF37 534 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 OR4D9Q8NGE8 314 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 CCHCR1Q8TD31 782 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 KCNK4Q9NYG8 393 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 FOXJ2Q9P0K8 574 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 VPS18Q9P253 973 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 ZNHIT2Q9UHR6 403 aa20.92■□□□□ 0.94
NEDD8-201ENST00000250495 IGHV1OR21-1A0A087WYE8 117 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 RGSL1A5PLK6 1076 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 ANKRD66B4E2M5 251 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 B8ZZF3 427 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 INPP4BO15327 924 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 JCHAINP01591 159 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 CCL4P13236 92 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 MAN1A1P33908 653 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 FASLGP48023 281 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 GPLD1P80108 840 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 SLC10A2Q12908 348 aaPredicted RBP20.91■□□□□ 0.94
NEDD8-201ENST00000250495 ATMQ13315 3056 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 NKAIN2Q5VXU1 208 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 RCBTB1Q8NDN9 531 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 CCDC112Q8NEF3 446 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 ZNF462Q96JM2 2506 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 CCDC74BQ96LY2 380 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 RNF157Q96PX1 679 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 TAAR9Q96RI9 348 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 MLPHQ9BV36 600 aaPredicted RBP20.91■□□□□ 0.94
NEDD8-201ENST00000250495 DEF6Q9H4E7 631 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 FAM83DQ9H4H8 585 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 DTLQ9NZJ0 730 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 PKD2L2Q9NZM6 624 aa20.91■□□□□ 0.94
NEDD8-201ENST00000250495 ZFC3H1O60293 1989 aaKnown RBP20.9■□□□□ 0.94
NEDD8-201ENST00000250495 C1orf232A0A0U1RR37 186 aa20.9■□□□□ 0.94
NEDD8-201ENST00000250495 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.9■□□□□ 0.94
NEDD8-201ENST00000250495 CSTF2P33240 577 aaKnown RBP eCLIP20.9■□□□□ 0.948e-15■■■■□ 21.9
NEDD8-201ENST00000250495 SPINT3P49223 89 aa20.9■□□□□ 0.94
NEDD8-201ENST00000250495 TMEM71Q6P5X7 295 aa20.9■□□□□ 0.94
NEDD8-201ENST00000250495 AGBL5Q8NDL9 886 aa20.9■□□□□ 0.94
NEDD8-201ENST00000250495 OR8K1Q8NGG5 319 aa20.9■□□□□ 0.94
NEDD8-201ENST00000250495 LRRN4Q8WUT4 740 aa20.9■□□□□ 0.94
NEDD8-201ENST00000250495 AHCYL2Q96HN2 611 aaKnown RBP20.9■□□□□ 0.94
NEDD8-201ENST00000250495 SLC38A3Q99624 504 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms