RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 CDC7O00311 574 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 GPC4O75487 556 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 FOXA1P55317 472 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 RHOAP61586 193 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 BLMHQ13867 455 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 CEACAM7Q14002 265 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 TSNQ15631 228 aaKnown RBP21.58■■□□□ 1.05
CLN6-201ENST00000249806 ZNF423Q2M1K9 1284 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 PIGGQ5H8A4 983 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 KBTBD6Q86V97 674 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 PGAM4Q8N0Y7 254 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 OR6K2Q8NGY2 324 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 KIAA1191Q96A73 305 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 TM6SF2Q9BZW4 377 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 CXorf56Q9H5V9 222 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 DNAJC15Q9Y5T4 150 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 PTGDR2Q9Y5Y4 395 aa21.58■■□□□ 1.05
CLN6-201ENST00000249806 TEX28O15482 410 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 NIPSNAP2O75323 286 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 HSPA1AP0DMV8 641 aaKnown RBP21.57■■□□□ 1.04
CLN6-201ENST00000249806 HSPA1BP0DMV9 641 aaKnown RBP21.57■■□□□ 1.04
CLN6-201ENST00000249806 XRCC1P18887 633 aaPredicted RBP21.57■■□□□ 1.04
CLN6-201ENST00000249806 CDH18Q13634 790 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 INO80DQ53TQ3 878 aaPredicted RBP21.57■■□□□ 1.04
CLN6-201ENST00000249806 IZUMO2Q6UXV1 221 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 LARP4Q71RC2 724 aaKnown RBP eCLIP21.57■■□□□ 1.044e-6■□□□□ 9.4
CLN6-201ENST00000249806 DHDDSQ86SQ9 333 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 CLYBLQ8N0X4 340 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 TTC30BQ8N4P2 665 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 STAG3L4Q8TBR4 150 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 EID2BQ96D98 161 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 ALG14Q96F25 216 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 SERPINI1Q99574 410 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 DERL2Q9GZP9 239 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 SPG21Q9NZD8 308 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 RNF112Q9ULX5 631 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 LRCH1Q9Y2L9 728 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 A0A1B0GTL3 188 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 LCHNA4D1U4 455 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 SUPT3HB4E1H0 165 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 SUPT3HO75486 399 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 CTPS1P17812 591 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 RAD51Q06609 339 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 AGKQ53H12 422 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 ZNF783Q6ZMS7 281 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 RAB44Q7Z6P3 723 aaPredicted RBP21.57■■□□□ 1.04
CLN6-201ENST00000249806 ADGRG6Q86SQ4 1221 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 APCDD1Q8J025 514 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 SIDT2Q8NBJ9 832 aaKnown RBP21.57■■□□□ 1.04
CLN6-201ENST00000249806 TRPC4APQ8TEL6 797 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 UCMAQ8WVF2 138 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 KCNA7Q96RP8 456 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 RC3H2Q9HBD1 1191 aaKnown RBP21.57■■□□□ 1.04
CLN6-201ENST00000249806 PLK2Q9NYY3 685 aa21.57■■□□□ 1.04
CLN6-201ENST00000249806 PSMD12O00232 456 aaPredicted RBP21.56■■□□□ 1.04
CLN6-201ENST00000249806 KERAO60938 352 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 CLASP2O75122 1294 aaKnown RBP21.56■■□□□ 1.04
CLN6-201ENST00000249806 RAG1P15918 1043 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 CYP4F8P98187 520 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 MS4A2Q01362 244 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 FASTKQ14296 549 aaKnown RBP21.56■■□□□ 1.04
CLN6-201ENST00000249806 GEN1Q17RS7 908 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 CTSL3PQ5NE16 218 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 DDX53Q86TM3 631 aaKnown RBP21.56■■□□□ 1.04
CLN6-201ENST00000249806 HJURPQ8NCD3 748 aaPredicted RBP21.56■■□□□ 1.04
CLN6-201ENST00000249806 C19orf60Q96EN9 201 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 OAS3Q9Y6K5 1087 aaKnown RBP21.56■■□□□ 1.04
CLN6-201ENST00000249806 NCF1BA6NI72 391 aaPredicted RBP21.56■■□□□ 1.04
CLN6-201ENST00000249806 NCF1CA8MVU1 366 aaPredicted RBP21.56■■□□□ 1.04
CLN6-201ENST00000249806 H3BNX3 289 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 SMAD6O43541 496 aaKnown RBP21.56■■□□□ 1.04
CLN6-201ENST00000249806 ALPIP09923 528 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 NCF1P14598 390 aaPredicted RBP21.56■■□□□ 1.04
CLN6-201ENST00000249806 PKMP14618 531 aaKnown RBP21.56■■□□□ 1.04
CLN6-201ENST00000249806 ITGB8P26012 769 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 CA8P35219 290 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 SQLEQ14534 574 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 LPCAT4Q643R3 524 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 Q6ZNB5 142 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 CAMK1DQ8IU85 385 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 OR9I1Q8NGQ6 314 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 MRPL17Q9NRX2 175 aaKnown RBP21.56■■□□□ 1.04
CLN6-201ENST00000249806 GIMAP2Q9UG22 337 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 OBSL1O75147 1896 aa21.56■■□□□ 1.04
CLN6-201ENST00000249806 PDE4DIPQ5VU43 2346 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 NPEPPSL1A6NEC2 478 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 GFRA2O00451 464 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 FZD6O60353 706 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 ECI2O75521 394 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 EEF1DP29692 281 aaKnown RBP21.55■■□□□ 1.04
CLN6-201ENST00000249806 TTPAP49638 278 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 ATXN3P54252 364 aaPredicted RBP21.55■■□□□ 1.04
CLN6-201ENST00000249806 TAS2R42Q7RTR8 314 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 PCDH20Q8N6Y1 951 aaKnown RBP21.55■■□□□ 1.04
CLN6-201ENST00000249806 FUBP1Q96AE4 644 aaKnown RBP21.55■■□□□ 1.04
CLN6-201ENST00000249806 MRPL1Q9BYD6 325 aaKnown RBP21.55■■□□□ 1.04
CLN6-201ENST00000249806 AKTIPQ9H8T0 292 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 CLEC4EQ9ULY5 219 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 TYW5A2RUC4 315 aaKnown RBP21.55■■□□□ 1.04
CLN6-201ENST00000249806 IQCF5A8MTL0 148 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms