RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 TMCC1O94876 653 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 PRAMEF12O95522 483 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 CRTAMO95727 393 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 DNAJB1P25685 340 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 GKP32189 559 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 ARF5P84085 180 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 SEMG2Q02383 582 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 SCIMPQ6UWF3 145 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 SLC22A9Q8IVM8 553 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 CPSF7Q8N684 471 aaKnown RBP15.71■□□□□ 0.11
LRFN1-201ENST00000248668 WFDC5Q8TCV5 224 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 CCDC126Q96EE4 140 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 AARSD1Q9BTE6 412 aaKnown RBP15.71■□□□□ 0.11
LRFN1-201ENST00000248668 YIPF2Q9BWQ6 316 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 TDRD1Q9BXT4 1180 aaKnown RBP15.71■□□□□ 0.11
LRFN1-201ENST00000248668 EFCAB1Q9HAE3 211 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 VPS28Q9UK41 221 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 NPEPPSL1A6NEC2 478 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 MC4RP32245 332 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 ZNF140P52738 457 aaPredicted RBP15.71■□□□□ 0.11
LRFN1-201ENST00000248668 TRAF2Q12933 501 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 SLC14A2Q15849 920 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 ADGRF1Q5T601 910 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 PAOXQ6QHF9 649 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 CYHR1Q6ZMK1 362 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 TAS2R42Q7RTR8 314 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 ARL14EPQ8N8R7 260 aaPredicted RBP15.71■□□□□ 0.11
LRFN1-201ENST00000248668 BHLHE22Q8NFJ8 381 aaPredicted RBP15.71■□□□□ 0.11
LRFN1-201ENST00000248668 TMEM175Q9BSA9 504 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 PCDHB9Q9Y5E1 797 aa15.71■□□□□ 0.11
LRFN1-201ENST00000248668 A0A1B0GVM2 712 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 TXNDC9O14530 226 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 GSTT1P30711 240 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 AQP4P55087 323 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 SMARCB1Q12824 385 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 PITRM1Q5JRX3 1037 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 CXorf57Q6NSI4 855 aaKnown RBP15.7■□□□□ 0.1
LRFN1-201ENST00000248668 AFAP1L2Q8N4X5 818 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 SIDT2Q8NBJ9 832 aaKnown RBP15.7■□□□□ 0.1
LRFN1-201ENST00000248668 ZNF461Q8TAF7 563 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 MAELQ96JY0 434 aaKnown RBP15.7■□□□□ 0.1
LRFN1-201ENST00000248668 RNF208Q9H0X6 261 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 GMPR2Q9P2T1 348 aaKnown RBP15.7■□□□□ 0.1
LRFN1-201ENST00000248668 RNF112Q9ULX5 631 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 TIMM22Q9Y584 194 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 C2orf81A6NN90 581 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 PSMD12O00232 456 aaPredicted RBP15.7■□□□□ 0.1
LRFN1-201ENST00000248668 PITPNM1O00562 1244 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 BNIP3LO60238 219 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 WISP3O95389 354 aaPredicted RBP15.7■□□□□ 0.1
LRFN1-201ENST00000248668 ALPIP09923 528 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 AGTR2P50052 363 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 ACVR1Q04771 509 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 KIF19Q2TAC6 998 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 PCDHAC1Q9H158 963 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 DNAAF2Q9NVR5 837 aaKnown RBP15.7■□□□□ 0.1
LRFN1-201ENST00000248668 STK39Q9UEW8 545 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 MED16Q9Y2X0 877 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 KIAA0100Q14667 2235 aaKnown RBP15.7■□□□□ 0.1
LRFN1-201ENST00000248668 H3BNX3 289 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 BTN3A1O00481 513 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 CDK14O94921 469 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 EPOP01588 193 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 MTHFD2P13995 350 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 ITGB6P18564 788 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 EEF1DP29692 281 aaKnown RBP15.7■□□□□ 0.1
LRFN1-201ENST00000248668 ARL1P40616 181 aaPredicted RBP15.7■□□□□ 0.1
LRFN1-201ENST00000248668 HERVK_113P63132 956 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 ZXDBP98169 803 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 TLE2Q04725 743 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 PTK2BQ14289 1009 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 SPATA24Q86W54 205 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 C2orf15Q8WU43 125 aaKnown RBP15.7■□□□□ 0.1
LRFN1-201ENST00000248668 ABTB1Q969K4 478 aaPredicted RBP15.7■□□□□ 0.1
LRFN1-201ENST00000248668 ZNF599Q96NL3 588 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 SERPINI1Q99574 410 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 ERVK-6Q9BXR3 956 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 CWH43Q9H720 699 aa15.7■□□□□ 0.1
LRFN1-201ENST00000248668 NLE1Q9NVX2 485 aaPredicted RBP15.7■□□□□ 0.1
LRFN1-201ENST00000248668 AFF4Q9UHB7 1163 aaKnown RBP15.7■□□□□ 0.1
LRFN1-201ENST00000248668 LINC00032P0C843 101 aa15.69■□□□□ 0.1
LRFN1-201ENST00000248668 HK2P52789 917 aa15.69■□□□□ 0.1
LRFN1-201ENST00000248668 ZNF423Q2M1K9 1284 aa15.69■□□□□ 0.1
LRFN1-201ENST00000248668 DNAJB7Q7Z6W7 309 aaPredicted RBP15.69■□□□□ 0.1
LRFN1-201ENST00000248668 PELI3Q8N2H9 469 aa15.69■□□□□ 0.1
LRFN1-201ENST00000248668 C19orf60Q96EN9 201 aa15.69■□□□□ 0.1
LRFN1-201ENST00000248668 TMEM169Q96HH4 297 aa15.69■□□□□ 0.1
LRFN1-201ENST00000248668 MRPL1Q9BYD6 325 aaKnown RBP15.69■□□□□ 0.1
LRFN1-201ENST00000248668 MEAF6Q9HAF1 191 aa15.69■□□□□ 0.1
LRFN1-201ENST00000248668 GALNT8Q9NY28 637 aa15.69■□□□□ 0.1
LRFN1-201ENST00000248668 ILVBLA1L0T0 632 aa15.69■□□□□ 0.1
LRFN1-201ENST00000248668 STX7O15400 261 aaKnown RBP15.69■□□□□ 0.1
LRFN1-201ENST00000248668 ZSCAN9O15535 394 aaPredicted RBP15.69■□□□□ 0.1
LRFN1-201ENST00000248668 GJA1P17302 382 aa15.69■□□□□ 0.1
LRFN1-201ENST00000248668 CR2P20023 1033 aa15.69■□□□□ 0.1
LRFN1-201ENST00000248668 TNK2Q07912 1038 aa15.69■□□□□ 0.1
LRFN1-201ENST00000248668 TRIM60Q495X7 471 aa15.69■□□□□ 0.1
LRFN1-201ENST00000248668 SETMARQ53H47 684 aaPredicted RBP15.69■□□□□ 0.1
LRFN1-201ENST00000248668 PIGGQ5H8A4 983 aa15.69■□□□□ 0.1
LRFN1-201ENST00000248668 AAGABQ6PD74 315 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms