RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 SMPD3Q9NY59 655 aaPredicted RBP16.81■□□□□ 0.28
SGPP1-201ENST00000247225 POLG2Q9UHN1 485 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 A0A0G2JLL6 359 aaPredicted RBP16.81■□□□□ 0.28
SGPP1-201ENST00000247225 SH3PXD2BA1X283 911 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 MATN3O15232 486 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 GOT2P00505 430 aaKnown RBP16.81■□□□□ 0.28
SGPP1-201ENST00000247225 OR4D2P58180 307 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 SPIDRQ14159 915 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 TRIM16LQ309B1 348 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 PRR23BQ6ZRT6 265 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 PRRT2Q7Z6L0 340 aaPredicted RBP16.81■□□□□ 0.28
SGPP1-201ENST00000247225 PSD4Q8NDX1 1056 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 NLGN2Q8NFZ4 835 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 CLHC1Q8NHS4 586 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 C17orf80Q9BSJ5 609 aa16.81■□□□□ 0.28
SGPP1-201ENST00000247225 FZD9O00144 591 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 GLP2RO95838 553 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 SLC2A3P11169 496 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 PSMD5Q16401 504 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 PYCR3Q53H96 274 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 ZC3H15Q8WU90 426 aaKnown RBP16.8■□□□□ 0.28
SGPP1-201ENST00000247225 SMARCD1Q96GM5 515 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 MAELQ96JY0 434 aaKnown RBP16.8■□□□□ 0.28
SGPP1-201ENST00000247225 FCRL5Q96RD9 977 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 HIPK3Q9H422 1215 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 CATSPERBQ9H7T0 1116 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 GDAP2Q9NXN4 497 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 NPEPPSL1A6NEC2 478 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 IQCF5A8MTL0 148 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 FFAR3O14843 346 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 GPR42O15529 346 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 GPR15P49685 360 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 SEMA3BQ13214 749 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 MEP1AQ16819 746 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 C18orf21Q32NC0 220 aaPredicted RBP16.8■□□□□ 0.28
SGPP1-201ENST00000247225 UGT3A1Q6NUS8 523 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 GALNT5Q7Z7M9 940 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 ITIH5Q86UX2 942 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 SLC22A9Q8IVM8 553 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 MTFMTQ96DP5 389 aaKnown RBP16.8■□□□□ 0.28
SGPP1-201ENST00000247225 CCDC126Q96EE4 140 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 TUBB1Q9H4B7 451 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 PRDM8Q9NQV8 689 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 POLE4Q9NR33 117 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 CD274Q9NZQ7 290 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 PNMA8BQ9ULN7 279 aaPredicted RBP16.8■□□□□ 0.28
SGPP1-201ENST00000247225 SLC27A5Q9Y2P5 690 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 MOXD2PA6NHM9 499 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 CCNA2P20248 432 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 CDKN1CP49918 316 aaPredicted RBP16.8■□□□□ 0.28
SGPP1-201ENST00000247225 TRAP1Q12931 704 aaKnown RBP16.8■□□□□ 0.28
SGPP1-201ENST00000247225 UGT3A2Q3SY77 523 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 ALFQ53S48 1182 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 RAP1GAP2Q684P5 730 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 GLYATQ6IB77 296 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 NANOGP8Q6NSW7 305 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 BTLAQ7Z6A9 289 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 LRRTM3Q86VH5 581 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 CILP2Q8IUL8 1156 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 BBS5Q8N3I7 341 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 LINC01465Q8N7H1 131 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 GPATCH1Q9BRR8 931 aaKnown RBP16.8■□□□□ 0.28
SGPP1-201ENST00000247225 DAPK2Q9UIK4 370 aa16.8■□□□□ 0.28
SGPP1-201ENST00000247225 CCDC162PA2VCL2 907 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 E9PAM4 449 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 ACAP2Q15057 778 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 TGFBIQ15582 683 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 SPESP1Q6UW49 350 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 ADGRG5Q8IZF4 528 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 TNIP2Q8NFZ5 429 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 CALML6Q8TD86 181 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 NTAN1Q96AB6 310 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 BIRC7Q96CA5 298 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 NSMCE2Q96MF7 247 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 RPRD1AQ96P16 312 aaPredicted RBP16.79■□□□□ 0.28
SGPP1-201ENST00000247225 HGH1Q9BTY7 390 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 LIMD1Q9UGP4 676 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 POLR2AP24928 1970 aaKnown RBP16.79■□□□□ 0.28
SGPP1-201ENST00000247225 RGPD3A6NKT7 1758 aaPredicted RBP16.79■□□□□ 0.28
SGPP1-201ENST00000247225 RGPD4Q7Z3J3 1758 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 A0A1W2PQH9 124 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 TRIM43BA6NCK2 446 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 TMEM247A6NEH6 219 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 DLGAP1O14490 977 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 PSMD3O43242 534 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 SNX2O60749 519 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 CCNCP24863 283 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 CLCQ05315 142 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 TRPV3Q8NET8 790 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 SEPT8Q92599 483 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 COX4I2Q96KJ9 171 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 GLT1D1Q96MS3 346 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 ZFP14Q9HCL3 533 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 SACM1LQ9NTJ5 587 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.79■□□□□ 0.28
SGPP1-201ENST00000247225 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.79■□□□□ 0.28
SGPP1-201ENST00000247225 SQORQ9Y6N5 450 aa16.79■□□□□ 0.28
SGPP1-201ENST00000247225 FUCA1P04066 466 aa16.78■□□□□ 0.28
SGPP1-201ENST00000247225 WARSP23381 471 aaKnown RBP16.78■□□□□ 0.28
SGPP1-201ENST00000247225 CLCN5P51795 746 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms