RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 RAPH1Q70E73 1250 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 DPPA4Q7L190 304 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 CBARPQ8N350 705 aaPredicted RBP18.5■□□□□ 0.55
SNX17-201ENST00000233575 IL17RCQ8NAC3 791 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 DYDC1Q8WWB3 177 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 FAM136AQ96C01 138 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 ASB8Q9H765 288 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 C8orf33Q9H7E9 229 aaPredicted RBP18.5■□□□□ 0.55
SNX17-201ENST00000233575 EMCNQ9ULC0 261 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 TM9SF1O15321 606 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 ADAM23O75077 832 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 CCT5P48643 541 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 RAB10P61026 200 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 CAMK2GQ13555 558 aaPredicted RBP18.5■□□□□ 0.55
SNX17-201ENST00000233575 ZKSCAN8Q15776 578 aaPredicted RBP18.5■□□□□ 0.55
SNX17-201ENST00000233575 GPR153Q6NV75 609 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 FBXL19Q6PCT2 694 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 PIM3Q86V86 326 aa18.5■□□□□ 0.55
SNX17-201ENST00000233575 WRAP53Q9BUR4 548 aaKnown RBP18.5■□□□□ 0.55
SNX17-201ENST00000233575 IQCGQ9H095 443 aaKnown RBP18.5■□□□□ 0.55
SNX17-201ENST00000233575 INTS10Q9NVR2 710 aaKnown RBP18.5■□□□□ 0.55
SNX17-201ENST00000233575 LRRK1Q38SD2 2015 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 WDR91A4D1P6 747 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 NDUFS3O75489 264 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 ADRB3P13945 408 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 STMN1P16949 149 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 FMO4P31512 558 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 ETV3P41162 512 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 IRX4P78413 519 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 TIAL1Q01085 375 aaKnown RBP eCLIP18.49■□□□□ 0.55
SNX17-201ENST00000233575 N4BP2L1Q5TBK1 243 aaPredicted RBP18.49■□□□□ 0.55
SNX17-201ENST00000233575 Q6ZVL8 140 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 SNX20Q7Z614 316 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 CLEC14AQ86T13 490 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 SPATA6LQ8N4H0 392 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 SCAMP4Q969E2 229 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 UNKQ9C0B0 810 aaKnown RBP18.49■□□□□ 0.55
SNX17-201ENST00000233575 TMEM216Q9P0N5 145 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 APPL1Q9UKG1 709 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 PLXNB3Q9ULL4 1909 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 MPOP05164 745 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 ZNF30P17039 623 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 GM2AP17900 193 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 NTSR1P30989 418 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 TTPAP49638 278 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 SATB1Q01826 763 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 POU4F1Q01851 419 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 GABPB1Q06547 395 aaPredicted RBP18.49■□□□□ 0.55
SNX17-201ENST00000233575 CNTN1Q12860 1018 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 DBN1Q16643 649 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 HHATQ5VTY9 493 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 DSG4Q86SJ6 1040 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 SERPINA9Q86WD7 417 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 TXNDC5Q8NBS9 432 aaKnown RBP18.49■□□□□ 0.55
SNX17-201ENST00000233575 ARMC2Q8NEN0 867 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 BIRC8Q96P09 236 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 TCF12Q99081 682 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 C19orf43Q9BQ61 176 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 BOCQ9BWV1 1114 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 C1QTNF1Q9BXJ1 281 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 RSPH9Q9H1X1 276 aaPredicted RBP18.49■□□□□ 0.55
SNX17-201ENST00000233575 ABCG8Q9H221 673 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 PSD3Q9NYI0 1048 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 MED16Q9Y2X0 877 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 VWA7Q9Y334 891 aa18.49■□□□□ 0.55
SNX17-201ENST00000233575 C1QTNF3-AMACRE9PGA6 284 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 AREL1O15033 823 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 MID1O15344 667 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 GLRA3O75311 464 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 DHRS4L1P0CG22 281 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 ITGALP20701 1170 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 COL9A1P20849 921 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 P2RY2P41231 377 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 GRSF1Q12849 480 aaKnown RBP eCLIP18.48■□□□□ 0.55
SNX17-201ENST00000233575 SEPT7Q16181 437 aaKnown RBP18.48■□□□□ 0.55
SNX17-201ENST00000233575 ERAP2Q6P179 960 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 LIPIQ6XZB0 460 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 ERN2Q76MJ5 926 aaKnown RBP18.48■□□□□ 0.55
SNX17-201ENST00000233575 CENPLQ8N0S6 344 aaPredicted RBP18.48■□□□□ 0.55
SNX17-201ENST00000233575 AADATQ8N5Z0 425 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 ZNF398Q8TD17 642 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 CKAP2Q8WWK9 683 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 PPP1R16AQ96I34 528 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 MKRN2Q9H000 416 aaKnown RBP18.48■□□□□ 0.55
SNX17-201ENST00000233575 SLC6A17Q9H1V8 727 aa18.48■□□□□ 0.55
SNX17-201ENST00000233575 TRBV5-4A0A0C4DH59 114 aa18.47■□□□□ 0.55
SNX17-201ENST00000233575 SYNCRIPO60506 623 aaKnown RBP18.47■□□□□ 0.55
SNX17-201ENST00000233575 KLF8O95600 359 aaPredicted RBP18.47■□□□□ 0.55
SNX17-201ENST00000233575 DRD1P21728 446 aa18.47■□□□□ 0.55
SNX17-201ENST00000233575 DRD3P35462 400 aa18.47■□□□□ 0.55
SNX17-201ENST00000233575 LIG3P49916 1009 aa18.47■□□□□ 0.55
SNX17-201ENST00000233575 COPAP53621 1224 aa18.47■□□□□ 0.55
SNX17-201ENST00000233575 SLC12A2P55011 1212 aa18.47■□□□□ 0.55
SNX17-201ENST00000233575 DLG1Q12959 904 aa18.47■□□□□ 0.55
SNX17-201ENST00000233575 TDGQ13569 410 aa18.47■□□□□ 0.55
SNX17-201ENST00000233575 CST6Q15828 149 aa18.47■□□□□ 0.55
SNX17-201ENST00000233575 ATP13A5Q4VNC0 1218 aa18.47■□□□□ 0.55
SNX17-201ENST00000233575 HABP4Q5JVS0 413 aaKnown RBP18.47■□□□□ 0.55
SNX17-201ENST00000233575 TMEM207Q6UWW9 146 aa18.47■□□□□ 0.55
SNX17-201ENST00000233575 KCTD4Q8WVF5 259 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms