RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SNX2O60749 519 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 BCAS1O75363 584 aaPredicted RBP14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 RSL1D1O76021 490 aaKnown RBP14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 GSNP06396 782 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 USP17L7P0C7H9 530 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 CPB1P15086 417 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 PTPN2P17706 415 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 MYF6P23409 242 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 IGFBP6P24592 240 aaPredicted RBP14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 ADRA1BP35368 520 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 KIAA0408Q6ZU52 694 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 LRRC49Q8IUZ0 686 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 OR7A2PQ8NGA2 310 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 NXF3Q9H4D5 531 aaKnown RBP14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 MOV10Q9HCE1 1003 aaKnown RBP14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 TBC1D13Q9NVG8 400 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 EXD2Q9NVH0 621 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 FBXO5Q9UKT4 447 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 COL11A2P13942 1736 aaPredicted RBP14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 TTC24A2A3L6 582 aaPredicted RBP14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 DLGAP1O14490 977 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 NUAK1O60285 661 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 HBP1O60381 514 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 KPNA6O60684 536 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 SEC24AO95486 1093 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 NPY2RP49146 381 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 CREB5Q02930 508 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 GRB7Q14451 532 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 GPR158Q5T848 1215 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 DCAF15Q66K64 600 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 TRAF7Q6Q0C0 670 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 CATSPER4Q7RTX7 472 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 PIM3Q86V86 326 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 FUNDC1Q8IVP5 155 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 CLEC4FQ8N1N0 589 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 TTC39CQ8N584 583 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 SPERTQ8NA61 448 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 RDH11Q8TC12 318 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 SEPT8Q92599 483 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 CSF3RQ99062 836 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 MRPL57Q9BQC6 102 aaKnown RBP14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 TDRD1Q9BXT4 1180 aaKnown RBP14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 ULBP1Q9BZM6 244 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 SLC7A5P2Q9GIP4 190 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 AKTIPQ9H8T0 292 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 IPO11Q9UI26 975 aaKnown RBP14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 TSR3Q9UJK0 312 aaKnown RBP14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 TCAF1Q9Y4C2 921 aa14.12□□□□□ -0.15
PCDHB3-201ENST00000231130 LINC00854A0A1B0GVQ3 168 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 YJEFN3A6XGL0 299 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 CRCPO75575 148 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 IPO13O94829 963 aaKnown RBP14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 ALDOCP09972 364 aaKnown RBP14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 CCDC159P0C7I6 412 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 BMPR1AP36894 532 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 OAZ1P54368 228 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 TMBIM6P55061 237 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 CELF3Q5SZQ8 465 aaKnown RBP14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 BTBD8Q5XKL5 378 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 ZDHHC17Q8IUH5 632 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 SYTL1Q8IYJ3 562 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 ANKRD49Q8WVL7 239 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 WNT8BQ93098 351 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 SDCCAG3Q96C92 435 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 MUS81Q96NY9 551 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 C9orf16Q9BUW7 83 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 ADPRHL2Q9NX46 363 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 OR12D3Q9UGF7 316 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 IGKV6-21A0A0C4DH24 114 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 OR51F1A6NGY5 319 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 KMOO15229 486 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 TOMM70O94826 608 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 PARNO95453 639 aaKnown RBP14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 UGT2B4P06133 528 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 IL7RP16871 459 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 CXCR2P25025 360 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 NOS2P35228 1153 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 TNK2Q07912 1038 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 PLA2G4EQ3MJ16 856 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 ERO1BQ86YB8 467 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 SMG8Q8ND04 991 aaKnown RBP14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 ISL2Q96A47 359 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 GPR78Q96P69 363 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 FUNDC2Q9BWH2 189 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 RMND5AQ9H871 391 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 EML4Q9HC35 981 aaKnown RBP14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 MID1IP1Q9NPA3 183 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 COQ3Q9NZJ6 369 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 TMEM181Q9P2C4 612 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 CD300AQ9UGN4 299 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 FNDC3AQ9Y2H6 1198 aaKnown RBP14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 NCF1BA6NI72 391 aaPredicted RBP14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 NCF1CA8MVU1 366 aaPredicted RBP14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 H0YJX3 145 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 UBFD1O14562 309 aaKnown RBP14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 DCLK1O15075 740 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 NCF1P14598 390 aaPredicted RBP14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 DPEP1P16444 411 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 CAPN3P20807 821 aa14.11□□□□□ -0.15
PCDHB3-201ENST00000231130 KCNC1P48547 511 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms