RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 UBASH3BQ8TF42 649 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 TMIGD2Q96BF3 282 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 HMCESQ96FZ2 354 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 RCOR3Q9P2K3 495 aaPredicted RBP13.7□□□□□ -0.22
NFKB1-201ENST00000226574 RBPJLQ9UBG7 517 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 NUP98P52948 1817 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 E9PAM4 449 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 CYBBP04839 570 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 ALDH2P05091 517 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 FUT4P22083 530 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 TTKP33981 857 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 POLR2JP52435 117 aaKnown RBP13.7□□□□□ -0.22
NFKB1-201ENST00000226574 ALDH6A1Q02252 535 aaKnown RBP13.7□□□□□ -0.22
NFKB1-201ENST00000226574 LAPTM5Q13571 262 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 TCEA2Q15560 299 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 PAQR3Q6TCH7 311 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 HIPK1Q86Z02 1210 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 CENPNQ96H22 339 aaPredicted RBP13.7□□□□□ -0.22
NFKB1-201ENST00000226574 NUAK2Q9H093 628 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 C1orf21Q9H246 121 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 REEP1Q9H902 201 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 GOT2P00505 430 aaKnown RBP13.7□□□□□ -0.22
NFKB1-201ENST00000226574 HLA-DQB2P05538 268 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 CAPN1P07384 714 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 POLD2P49005 469 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 MERTKQ12866 999 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 TAF10Q12962 218 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 CBX3Q13185 183 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 DPYSQ14117 519 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 CDCA2Q69YH5 1023 aaPredicted RBP13.7□□□□□ -0.22
NFKB1-201ENST00000226574 GPR142Q7Z601 462 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 TBC1D21Q8IYX1 336 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 ARL10Q8N8L6 244 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 PLEKHA8Q96JA3 519 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 SNX27Q96L92 541 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 HOPXQ9BPY8 73 aaPredicted RBP13.7□□□□□ -0.22
NFKB1-201ENST00000226574 DNAAF2Q9NVR5 837 aaKnown RBP13.7□□□□□ -0.22
NFKB1-201ENST00000226574 DNAJB4Q9UDY4 337 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 SETD1AO15047 1707 aaKnown RBP13.7□□□□□ -0.22
NFKB1-201ENST00000226574 RGS14O43566 566 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 ZNF182P17025 639 aaPredicted RBP13.69□□□□□ -0.22
NFKB1-201ENST00000226574 BNIP2Q12982 314 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 BORCS5Q969J3 196 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 OSBPL6Q9BZF3 934 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 CIPCQ9C0C6 399 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 ZBTB26Q9HCK0 441 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 PCDHB7Q9Y5E2 793 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 J3KR12 359 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 IQCF3P0C7M6 154 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 COL6A2P12110 1019 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 UGT1A1P22309 533 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 UGT1A4P22310 534 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 PRKACGP22612 351 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 AXLP30530 894 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 UGT1A3P35503 534 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 UGT1A5P35504 534 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 DIO3P55073 304 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 IRF8Q02556 426 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 ACSM2AQ08AH3 577 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 SPANXN2Q5MJ10 180 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 ACSM2BQ68CK6 577 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 DEFB128Q7Z7B8 93 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 OSTM1Q86WC4 334 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 NKAPQ8N5F7 415 aaKnown RBP13.69□□□□□ -0.22
NFKB1-201ENST00000226574 ZNF513Q8N8E2 541 aaPredicted RBP13.69□□□□□ -0.22
NFKB1-201ENST00000226574 OR52J3Q8NH60 311 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 PPTC7Q8NI37 304 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 ASB2Q96Q27 587 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 GMIPQ9P107 970 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 ZNF142P52746 1687 aaPredicted RBP13.69□□□□□ -0.22
NFKB1-201ENST00000226574 ASLP04424 464 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 COX7A2P14406 83 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 SMPD1P17405 629 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 CRATP43155 626 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 DUSP4Q13115 394 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 TSTD2Q5T7W7 516 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 SEPT8Q92599 483 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 NACC2Q96BF6 587 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 APOLD1Q96LR9 279 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 PANX1Q96RD7 426 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 TIMMDC1Q9NPL8 285 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 OGDHLQ9ULD0 1010 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 IQCA1LA6NCM1 817 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.69□□□□□ -0.22
NFKB1-201ENST00000226574 ASNA1O43681 348 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 MMP3P08254 477 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 COL6A1P12109 1028 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 GPC1P35052 558 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 HNF4AP41235 474 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 HMGCS1Q01581 520 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 IKBKEQ14164 716 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 TOP6BLQ8N6T0 577 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 APOL4Q9BPW4 351 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 TRMOQ9BU70 441 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 PNPLA8Q9NP80 782 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 MOCS1Q9NZB8 636 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 TEKT2Q9UIF3 430 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 PADI4Q9UM07 663 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 SH3GLB1Q9Y371 365 aa13.69□□□□□ -0.22
NFKB1-201ENST00000226574 HEMK1Q9Y5R4 338 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms