RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 UGT3A1Q6NUS8 523 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 GLT6D1Q7Z4J2 308 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 MFN1Q8IWA4 741 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 ARHGAP18Q8N392 663 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 FBXO39Q8N4B4 442 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 SIDT2Q8NBJ9 832 aaKnown RBP14.57□□□□□ -0.08
CNOT3-201ENST00000221232 MDGA1Q8NFP4 955 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 MPP4Q96JB8 637 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 CNOT6Q9ULM6 557 aaKnown RBP14.57□□□□□ -0.08
CNOT3-201ENST00000221232 TDRD15B5MCY1 1934 aaKnown RBP14.57□□□□□ -0.08
CNOT3-201ENST00000221232 IGLV3-10A0A075B6K4 115 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 NME4O00746 187 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 ANGPT2O15123 496 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 ADAM12O43184 909 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 SEC24DO94855 1032 aaPredicted RBP14.57□□□□□ -0.08
CNOT3-201ENST00000221232 MTHFD1P11586 935 aaKnown RBP14.57□□□□□ -0.08
CNOT3-201ENST00000221232 BMP1P13497 986 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 NCK1P16333 377 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 PSMC3P17980 439 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 CLCQ05315 142 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 MYLK3Q32MK0 819 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 PIANPQ8IYJ0 282 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 L3HYPDHQ96EM0 354 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 AARSD1Q9BTE6 412 aaKnown RBP14.57□□□□□ -0.08
CNOT3-201ENST00000221232 CINPQ9BW66 212 aaPredicted RBP14.57□□□□□ -0.08
CNOT3-201ENST00000221232 UPF3AQ9H1J1 476 aaKnown RBP14.57□□□□□ -0.08
CNOT3-201ENST00000221232 TMEM181Q9P2C4 612 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 SUCOQ9UBS9 1254 aaKnown RBP14.57□□□□□ -0.08
CNOT3-201ENST00000221232 CD300AQ9UGN4 299 aa14.57□□□□□ -0.08
CNOT3-201ENST00000221232 MTMR11A4FU01 709 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 DRGXA6NNA5 263 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 ECI2O75521 394 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 INHBCP55103 352 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 PLOD1Q02809 727 aaPredicted RBP14.56□□□□□ -0.08
CNOT3-201ENST00000221232 IKBKEQ14164 716 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 C18orf21Q32NC0 220 aaPredicted RBP14.56□□□□□ -0.08
CNOT3-201ENST00000221232 PARP15Q460N3 678 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 ZRANB3Q5FWF4 1079 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 ZBTB49Q6ZSB9 765 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 CATSPER1Q8NEC5 780 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 FUBP3Q96I24 572 aaKnown RBP eCLIP14.56□□□□□ -0.08
CNOT3-201ENST00000221232 SLAMF8Q9P0V8 285 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 POLG2Q9UHN1 485 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 USP22Q9UPT9 525 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 RNF11Q9Y3C5 154 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 ASB1Q9Y576 335 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 SNUPNO95149 360 aaKnown RBP14.56□□□□□ -0.08
CNOT3-201ENST00000221232 WISP3O95389 354 aaPredicted RBP14.56□□□□□ -0.08
CNOT3-201ENST00000221232 STAMBPO95630 424 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 FGF1P05230 155 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 ITGB6P18564 788 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 RPL5P46777 297 aaKnown RBP14.56□□□□□ -0.08
CNOT3-201ENST00000221232 STC1P52823 247 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 CDH15P55291 814 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 GNA12Q03113 381 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 RBBP7Q16576 425 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 RABL3Q5HYI8 236 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 SAMD4BQ5PRF9 694 aaKnown RBP14.56□□□□□ -0.08
CNOT3-201ENST00000221232 PSAPL1Q6NUJ1 521 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 MIER2Q8N344 545 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 ZFP28Q8NHY6 868 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 PRICKLE1Q96MT3 831 aaPredicted RBP14.56□□□□□ -0.08
CNOT3-201ENST00000221232 ATOH8Q96SQ7 321 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 RNF186Q9NXI6 227 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 TRPM7Q96QT4 1865 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 H3BSA7 217 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 SOCS2O14508 198 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 VILLO15195 856 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 VNN2O95498 520 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 HLA-DPA1P20036 260 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 ACLYP53396 1101 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 SETMARQ53H47 684 aaPredicted RBP14.56□□□□□ -0.08
CNOT3-201ENST00000221232 TAS2R42Q7RTR8 314 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 TMIGD2Q96BF3 282 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 FEM1CQ96JP0 617 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 SMPD4Q9NXE4 827 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 FKBPLQ9UIM3 349 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 NDUFAF1Q9Y375 327 aa14.56□□□□□ -0.08
CNOT3-201ENST00000221232 TMEM88BA6NKF7 163 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 TNFAIP8O95379 198 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 NDST3O95803 873 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 CLIC3O95833 236 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 ALDH2P05091 517 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 TBCELQ5QJ74 424 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 AP1ARQ63HQ0 302 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 CCSAPQ6IQ19 270 aaPredicted RBP14.55□□□□□ -0.08
CNOT3-201ENST00000221232 KLHDC10Q6PID8 442 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 PCYOX1LQ8NBM8 494 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 EEF1AKMT1Q8WVE0 214 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 PBXIP1Q96AQ6 731 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 TMEM74Q96NL1 305 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 TRMOQ9BU70 441 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 TAS2R13Q9NYV9 303 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 TBC1D30Q9Y2I9 924 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 MED16Q9Y2X0 877 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 A8MX80 341 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 HOXD9P28356 352 aaPredicted RBP14.55□□□□□ -0.08
CNOT3-201ENST00000221232 PRKCQQ04759 706 aa14.55□□□□□ -0.08
CNOT3-201ENST00000221232 RBBP5Q15291 538 aaKnown RBP14.55□□□□□ -0.08
CNOT3-201ENST00000221232 AAK1Q2M2I8 961 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms