RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 ANKFN1Q8N957 763 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 C2CD4AQ8NCU7 369 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 NT5C3BQ969T7 300 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 NXNL1Q96CM4 212 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 SGF29Q96ES7 293 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 SENP8Q96LD8 212 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 ING2Q9H160 280 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 MEAF6Q9HAF1 191 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 ANLNQ9NQW6 1124 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 PIGVQ9NUD9 493 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 KLK14Q9P0G3 267 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 SPATA7Q9P0W8 599 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 ZDHHC2Q9UIJ5 367 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 PCDHGA5Q9Y5G8 931 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 HCFC2Q9Y5Z7 792 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 KAT6AQ92794 2004 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 LCHNA4D1U4 455 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 FAM86C2PA6NEL3 165 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 KCNU1A8MYU2 1149 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 EIF3FO00303 357 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 SDHDO14521 159 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 CLOCKO15516 846 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 SNX2O60749 519 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 PAPSS2O95340 614 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 LDLRP01130 860 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 ALBP02768 609 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 THP07101 528 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 RETP07949 1114 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 MMP3P08254 477 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 IQCF3P0C7M6 154 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 SLC35E2BP0CK96 405 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 CYBAP13498 195 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 AKAP5P24588 427 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 ABCG1P45844 678 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 PSMD8P48556 350 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 LILRA4P59901 499 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 MPP1Q00013 466 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 OCA2Q04671 838 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 SFSWAPQ12872 951 aaKnown RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 COL19A1Q14993 1142 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 MGAT5BQ3V5L5 792 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 PPM1LQ5SGD2 360 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 KCTD11Q693B1 232 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 GRAMD4Q6IC98 578 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 TAF2Q6P1X5 1199 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 CLEC20AQ6ZU45 233 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 GALNT7Q86SF2 657 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 DHRSXQ8N5I4 330 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 RNF148Q8N7C7 305 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 KDF1Q8NAX2 398 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 PDPRQ8NCN5 879 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 DDHD1Q8NEL9 900 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 PDZD8Q8NEN9 1154 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 PRSS33Q8NF86 280 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 ZSCAN18Q8TBC5 510 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 DIS3LQ8TF46 1054 aaKnown RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 KBTBD7Q8WVZ9 684 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 CYGBQ8WWM9 190 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 ATP6V1E2Q96A05 226 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 DUS3LQ96G46 650 aaKnown RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 CENPNQ96H22 339 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 CELF6Q96J87 481 aaKnown RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 ZNF597Q96LX8 424 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 SERPINB11Q96P15 392 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 BDH2Q9BUT1 245 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 MLPHQ9BV36 600 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 FTHL17Q9BXU8 183 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 EIF2AQ9BY44 585 aaKnown RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 NXF3Q9H4D5 531 aaKnown RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 PDGFCQ9NRA1 345 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 ABCC13Q9NSE7 274 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 DDX18Q9NVP1 670 aaKnown RBP3.98□□□□□ -1.77
SCN1A-214ENST00000637038 GALNT8Q9NY28 637 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 CACNA2D2Q9NY47 1150 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 CCDC167Q9P0B6 97 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 TMEM9Q9P0T7 183 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 ANAPC2Q9UJX6 822 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 ITGB1BP2Q9UKP3 347 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 MFHAS1Q9Y4C4 1052 aa3.98□□□□□ -1.77
SCN1A-214ENST00000637038 C17orf102A2RUQ5 167 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 ZNF839A8K0R7 811 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 GABRDO14764 452 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 PPEF2O14830 753 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 KATNA1O75449 491 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 LRIG2O94898 1065 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 USP17L7P0C7H9 530 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 SMIM10L2AP0DMW4 78 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 SMIM10L2BP0DMW5 78 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 IMPDH1P20839 514 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 LMO2P25791 158 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 ARL1P40616 181 aaPredicted RBP3.97□□□□□ -1.77
SCN1A-214ENST00000637038 SLC7A2P52569 658 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 ATXN3P54252 364 aaPredicted RBP3.97□□□□□ -1.77
SCN1A-214ENST00000637038 TAS2R39P59534 338 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 PHEXP78562 749 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 YWHAHQ04917 246 aaPredicted RBP3.97□□□□□ -1.77
SCN1A-214ENST00000637038 RAD51Q06609 339 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 TNK2Q07912 1038 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 GRB14Q14449 540 aa3.97□□□□□ -1.77
SCN1A-214ENST00000637038 NRF1Q16656 503 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms