RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PTPRCAPQ14761 206 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 FASTKD3Q14CZ7 662 aaKnown RBP14.42□□□□□ -0.1
LINC00339-208ENST00000634934 ACOX1Q15067 660 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 USP39Q53GS9 565 aaKnown RBP14.42□□□□□ -0.1
LINC00339-208ENST00000634934 SEL1L3Q68CR1 1132 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 CES3Q6UWW8 571 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 IGDCC3Q8IVU1 814 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 FRMD1Q8N878 549 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 FBXO36Q8NEA4 188 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 OR4K2Q8NGD2 314 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 LRRC39Q96DD0 335 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 CFAP36Q96G28 342 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 RANBP9Q96S59 729 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 EBNA1BP2Q99848 306 aaKnown RBP14.42□□□□□ -0.1
LINC00339-208ENST00000634934 TRIM56Q9BRZ2 755 aaKnown RBP14.42□□□□□ -0.1
LINC00339-208ENST00000634934 TACO1Q9BSH4 297 aaKnown RBP14.42□□□□□ -0.1
LINC00339-208ENST00000634934 KDM4CQ9H3R0 1056 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 PREBQ9HCU5 417 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 NOVA2Q9UNW9 492 aaKnown RBP14.42□□□□□ -0.1
LINC00339-208ENST00000634934 FNDC3AQ9Y2H6 1198 aaKnown RBP14.42□□□□□ -0.1
LINC00339-208ENST00000634934 PKP3Q9Y446 797 aa14.42□□□□□ -0.1
LINC00339-208ENST00000634934 IGHV1OR15-9A0A0B4J2B8 117 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 A0A1W2PQU0 124 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 MAGEB16A2A368 324 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 IGLON5A6NGN9 336 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 NDUFS2O75306 463 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 GSTA1P08263 222 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 C1SP09871 688 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 C6P13671 934 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 HMGCLP35914 325 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 MAGEA4P43358 317 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 STC1P52823 247 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 MAGOHP61326 146 aaKnown RBP14.41□□□□□ -0.1
LINC00339-208ENST00000634934 PDE1BQ01064 536 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 MAP7D1Q3KQU3 841 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 TSTD2Q5T7W7 516 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 GKAP1Q5VSY0 366 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-208ENST00000634934 NLRP9Q7RTR0 991 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 HSD11B1LQ7Z5J1 315 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 CACNA2D3Q8IZS8 1091 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 OR13C4Q8NGS5 318 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 OR2T34Q8NGX1 318 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 MAGEC3Q8TD91 643 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 PYROXD1Q8WU10 500 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 PTCD2Q8WV60 388 aaKnown RBP14.41□□□□□ -0.1
LINC00339-208ENST00000634934 EID2BQ96D98 161 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 CHMP6Q96FZ7 201 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 DNAJC1Q96KC8 554 aaKnown RBP14.41□□□□□ -0.1
LINC00339-208ENST00000634934 SPACA7Q96KW9 195 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 C9orf72Q96LT7 481 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 ZNF778Q96MU6 729 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 ZNF317Q96PQ6 595 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-208ENST00000634934 WDR83Q9BRX9 315 aaKnown RBP14.41□□□□□ -0.1
LINC00339-208ENST00000634934 KIFC1Q9BW19 673 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 GPR174Q9BXC1 333 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 WSB2Q9NYS7 404 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-208ENST00000634934 SLC2A6Q9UGQ3 507 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 ZC3H7BQ9UGR2 993 aaKnown RBP14.41□□□□□ -0.1
LINC00339-208ENST00000634934 SOX13Q9UN79 622 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 COQ6Q9Y2Z9 468 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 TEX264Q9Y6I9 313 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 EML5Q05BV3 1969 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 CACNA1HO95180 2353 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 MROH6A6NGR9 719 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 CCL22O00626 93 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 MAP3K13O43283 966 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 PGAM1P18669 254 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 DRD4P21917 467 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 NMBRP28336 390 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 ATP5DP30049 168 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 MAT2AP31153 395 aaKnown RBP14.41□□□□□ -0.1
LINC00339-208ENST00000634934 HPDP32754 393 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-208ENST00000634934 ETV3P41162 512 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 ZNF140P52738 457 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-208ENST00000634934 PPP2CBP62714 309 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 RPS21P63220 83 aaKnown RBP14.41□□□□□ -0.1
LINC00339-208ENST00000634934 PPP2CAP67775 309 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 SKIDA1Q1XH10 827 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 KIAA1161Q6NSJ0 714 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 CAPN12Q6ZSI9 719 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 Q6ZVL8 140 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 TAOK1Q7L7X3 1001 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 OR2W6PQ8NHA6 318 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 STYXQ8WUJ0 223 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 KLK6Q92876 244 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 ZNF669Q96BR6 464 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-208ENST00000634934 CABS1Q96KC9 395 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 PRRX2Q99811 253 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 NAT9Q9BTE0 207 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 PHACTR1Q9C0D0 580 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 MRM3Q9HC36 420 aaKnown RBP14.41□□□□□ -0.1
LINC00339-208ENST00000634934 PKD2L2Q9NZM6 624 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 IL17CQ9P0M4 197 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 CD84Q9UIB8 345 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 FBXO4Q9UKT5 387 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 RPS6KL1Q9Y6S9 549 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 R4GN57 208 aa14.41□□□□□ -0.1
LINC00339-208ENST00000634934 CCDC163A0A0D9SF12 145 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 FAM237BA0A1B0GVD1 139 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 PSMD11O00231 422 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms