RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 CCNJLQ8IV13 435 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 RCOR2Q8IZ40 523 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 RNF10Q8N5U6 811 aaKnown RBP15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 LRRC57Q8N9N7 239 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 PLA2G15Q8NCC3 412 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 OR6C4Q8NGE1 309 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 EXD1Q8NHP7 514 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 HCAR2Q8TDS4 363 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 KRT35Q92764 455 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 EXTL1Q92935 676 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 MRPL40Q9NQ50 206 aaKnown RBP15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 SEPT3Q9UH03 358 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 GUCA1BQ9UMX6 200 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 LOXL2Q9Y4K0 774 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 PCDHGA7Q9Y5G6 932 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 HEY1Q9Y5J3 304 aa15.58■□□□□ 0.08
SNRNP48-203ENST00000634363 SCN8AQ9UQD0 1980 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 A8MX80 341 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 MAFKO60675 156 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 MAP3K6O95382 1288 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 WISP1O95388 367 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 CTNNA2P26232 953 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 CDKN2BP42772 138 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 RENBPP51606 427 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 MAPK10P53779 464 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 GBE1Q04446 702 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 ARHGEF7Q14155 803 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 GRM3Q14832 879 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 TFDP3Q5H9I0 405 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 KAZNQ674X7 775 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 SLC9A4Q6AI14 798 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 SFTPA2Q8IWL1 248 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 PLD5Q8N7P1 536 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 GPR156Q8NFN8 814 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 OR1E3Q8WZA6 343 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 SGF29Q96ES7 293 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 PDXPQ96GD0 296 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 TRIM4Q9C037 500 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 DPEP2Q9H4A9 486 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 HAUS2Q9NVX0 235 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 SEPT10Q9P0V9 454 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 LRIT1Q9P2V4 623 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 PCDHA3Q9Y5H8 950 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 CAPN6Q9Y6Q1 641 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 CFAP46Q8IYW2 2715 aa15.57■□□□□ 0.08
SNRNP48-203ENST00000634363 PRAMEF33A0A0G2JMD5 474 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 TMEM202A6NGA9 273 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 B4DGG1 531 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 CACNB4O00305 520 aaPredicted RBP15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 NVLO15381 856 aaKnown RBP15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 PRAMEF10O60809 474 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 GLB1P16278 677 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 CCKBRP32239 447 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 HSPA9P38646 679 aaKnown RBP15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 CETN2P41208 172 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 RWDD2BP57060 319 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 NFKB2Q00653 900 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 SLC10A7Q0GE19 358 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 MTM1Q13496 603 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 PPP2R5EQ16537 467 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 LINC00303Q3SY05 128 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 MANEAQ5SRI9 462 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 PHF19Q5T6S3 580 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 BRAT1Q6PJG6 821 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 NT5DC3Q86UY8 548 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 VASH2Q86V25 355 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 ZFAND4Q86XD8 727 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 UBL4BQ8N7F7 174 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 TSEN2Q8NCE0 465 aaKnown RBP15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 CCNYQ8ND76 341 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 OR56A4Q8NGH8 313 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 USP7Q93009 1102 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 ZNF641Q96N77 438 aaPredicted RBP15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 ALS2CR12Q96Q35 445 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 PSKH2Q96QS6 385 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 RBM15Q96T37 977 aaKnown RBP eCLIP15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 TMEM168Q9H0V1 697 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 SUDS3Q9H7L9 328 aaPredicted RBP15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 CYP4F12Q9HCS2 524 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 LZTFL1Q9NQ48 299 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 DTLQ9NZJ0 730 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 ATP8A1Q9Y2Q0 1164 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 PCDHB11Q9Y5F2 797 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 RNF215Q9Y6U7 377 aa15.56■□□□□ 0.08
SNRNP48-203ENST00000634363 CYSRT1A8MQ03 144 aa15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 MIF4GDA9UHW6 222 aaKnown RBP15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 PPP1R12AO14974 1030 aaPredicted RBP15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 CST8O60676 142 aa15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 RECQL5O94762 991 aaPredicted RBP15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 FTCDO95954 541 aa15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 LIPCP11150 499 aa15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 MMP12P39900 470 aa15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 ETV5P41161 510 aa15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 MMP13P45452 471 aa15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 COPS2P61201 443 aa15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 PDK1Q15118 436 aa15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 LLGL1Q15334 1064 aa15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 TAZQ16635 292 aa15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 MARC1Q5VT66 337 aa15.55■□□□□ 0.08
SNRNP48-203ENST00000634363 ZNF662Q6ZS27 426 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms