RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 SLC13A5Q86YT5 568 aaPredicted RBP11.08□□□□□ -0.64
DDX41-219ENST00000629036 CDKL3Q8IVW4 592 aaPredicted RBP11.08□□□□□ -0.64
DDX41-219ENST00000629036 RAVER1Q8IY67 606 aaKnown RBP11.08□□□□□ -0.64
DDX41-219ENST00000629036 PHACTR4Q8IZ21 702 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 TTC30BQ8N4P2 665 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 EID2Q8N6I1 236 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 OR4C6Q8NH72 309 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 RHBDD1Q8TEB9 315 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 SETD7Q8WTS6 366 aaKnown RBP11.08□□□□□ -0.64
DDX41-219ENST00000629036 HNRNPLLQ8WVV9 542 aaKnown RBP11.08□□□□□ -0.64
DDX41-219ENST00000629036 ATG4AQ8WYN0 398 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 SCAMP4Q969E2 229 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 SCARF2Q96GP6 870 aaPredicted RBP11.08□□□□□ -0.64
DDX41-219ENST00000629036 COX14Q96I36 57 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 SPATA13Q96N96 652 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 SLC32A1Q9H598 525 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 HAUS2Q9NVX0 235 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 DNAJC28Q9NX36 388 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 KLHL8Q9P2G9 620 aaPredicted RBP11.08□□□□□ -0.64
DDX41-219ENST00000629036 FAM153AQ9UHL3 310 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 TRHDEQ9UKU6 1024 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 DNPEPQ9ULA0 475 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 PCYT1BQ9Y5K3 369 aaPredicted RBP11.08□□□□□ -0.64
DDX41-219ENST00000629036 DGKBQ9Y6T7 804 aa11.08□□□□□ -0.64
DDX41-219ENST00000629036 C1orf232A0A0U1RR37 186 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 C5orf60A6NFR6 353 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 FADS2P1A8MWK0 482 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 H7C0C1 242 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 GAPDHSO14556 408 aaPredicted RBP11.07□□□□□ -0.64
DDX41-219ENST00000629036 SCAMP1O15126 338 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 KCNN4O15554 427 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 SIGLEC6O43699 453 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 LIASO43766 372 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 EPOP01588 193 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 CEACAM5P06731 702 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 ITGAVP06756 1048 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 MYCLP1P12525 358 aaPredicted RBP11.07□□□□□ -0.64
DDX41-219ENST00000629036 TSHRP16473 764 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 JUNDP17535 347 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 CA4P22748 312 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 PSMB4P28070 264 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 ATP5OP48047 213 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 SPINT3P49223 89 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 HK3P52790 923 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 DCDC1P59894 354 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 HNRNPKP61978 463 aaKnown RBP eCLIP11.07□□□□□ -0.64
DDX41-219ENST00000629036 CDK3Q00526 305 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 DNAJC3Q13217 504 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 SUZ12Q15022 739 aaKnown RBP11.07□□□□□ -0.64
DDX41-219ENST00000629036 SLC1A5Q15758 541 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 PCSK7Q16549 785 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 DENND5AQ6IQ26 1287 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 ADAMTSL4Q6UY14 1074 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 RANBP10Q6VN20 620 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 TMC3Q7Z5M5 1100 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 HEATR4Q86WZ0 1026 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 CHCHD4Q8N4Q1 142 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 TRIM58Q8NG06 486 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 CCDC110Q8TBZ0 833 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 UBE2Q2Q8WVN8 375 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 ADAMTS14Q8WXS8 1223 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 TSACCQ96A04 125 aaPredicted RBP11.07□□□□□ -0.64
DDX41-219ENST00000629036 WDR92Q96MX6 357 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 CDC6Q99741 560 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 WDR26Q9H7D7 661 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 MAGEE1Q9HCI5 957 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 MRPL40Q9NQ50 206 aaKnown RBP11.07□□□□□ -0.64
DDX41-219ENST00000629036 NLGN3Q9NZ94 848 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 APOBEC3BQ9UH17 382 aaKnown RBP11.07□□□□□ -0.64
DDX41-219ENST00000629036 CD84Q9UIB8 345 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 TMPRSS11EQ9UL52 423 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 SLC17A4Q9Y2C5 497 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 ZNF711Q9Y462 761 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 CSNK1G3Q9Y6M4 447 aa11.07□□□□□ -0.64
DDX41-219ENST00000629036 FAM221BA6H8Z2 402 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 USP27XA6NNY8 438 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 CYSRT1A8MQ03 144 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 LMO7DNF2Z398 122 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 TNFRSF10CO14798 259 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 FANCGO15287 622 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 AQP9O43315 295 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 TNFSF14O43557 240 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 METTL18O95568 372 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 CA5AP35218 305 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 THOP1P52888 689 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 EPHB1P54762 984 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 SRP54P61011 504 aaKnown RBP11.06□□□□□ -0.64
DDX41-219ENST00000629036 MPP3Q13368 585 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 ARHGEF7Q14155 803 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 PTK2BQ14289 1009 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 RPS6KA1Q15418 735 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 DENND2CQ68D51 928 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 PID1Q7Z2X4 250 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 KDELC2Q7Z4H8 507 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 TRIM74Q86UV6 250 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 NRSN1Q8IZ57 195 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 PNPLA1Q8N8W4 532 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 FAM71DQ8N9W8 422 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 FAM181AQ8N9Y4 354 aa11.06□□□□□ -0.64
DDX41-219ENST00000629036 GLIS1Q8NBF1 620 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms