RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 ZNF470Q6ECI4 717 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 FSTL4Q6MZW2 842 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 LYSMD3Q7Z3D4 306 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 LDB1Q86U70 411 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 LMNTD2Q8IXW0 634 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 NDUFAF2Q8N183 169 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 DCLK2Q8N568 766 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 PNPLA1Q8N8W4 532 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 BANPQ8N9N5 519 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 KDM1BQ8NB78 822 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 OR4L1Q8NH43 312 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 GABPB2Q8TAK5 448 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 CSGALNACT1Q8TDX6 532 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 EID2BQ96D98 161 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 VPS39Q96JC1 886 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 RHOJQ9H4E5 214 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 UBE2ZQ9H832 354 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 MLXIPLQ9NP71 852 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 SSU72Q9NP77 194 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 FBXO6Q9NRD1 293 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 PCMTD2Q9NV79 361 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 INTS9Q9NV88 658 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 NKIRAS1Q9NYS0 192 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 MARCH4Q9P2E8 410 aaPredicted RBP9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 IL36AQ9UHA7 158 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 FBXO5Q9UKT4 447 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 MTO1Q9Y2Z2 717 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 KIAA1549LQ6ZVL6 1849 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 C5orf42Q9H799 3197 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 C1orf232A0A0U1RR37 186 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 EDDM13A0A1B0GTR0 161 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 NPIPB15A6NHN6 443 aaPredicted RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 A6NNZ2 444 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 A8MX80 341 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 COPEO14579 308 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 CD3EAPO15446 510 aaKnown RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 HAUS5O94927 633 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 CLDN7O95471 211 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 ALDOAP04075 364 aaKnown RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 MC4RP32245 332 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 RPA3P35244 121 aaPredicted RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 HMGCLP35914 325 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 CCNFP41002 786 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 GRIA2P42262 883 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 IL12RB1P42701 662 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 LEPRP48357 1165 aaKnown RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 SERPINB8P50452 374 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 GALK1P51570 392 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 SLC18A1P54219 525 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 SEMG2Q02383 582 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 GABPB1Q06547 395 aaPredicted RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 CDKN3Q16667 212 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 HNRNPA1L2Q32P51 320 aaKnown RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 TUBB8Q3ZCM7 444 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 PREPLQ4J6C6 727 aaPredicted RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 FASTKD1Q53R41 847 aaKnown RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZNF789Q5FWF6 425 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 LRRC73Q5JTD7 316 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 AFTPHQ6ULP2 937 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 SERPINA13PQ6UXR4 307 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 KIAA0408Q6ZU52 694 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 TPRG1Q6ZUI0 275 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 TSPAN33Q86UF1 283 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZC3HC1Q86WB0 502 aaKnown RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 CILP2Q8IUL8 1156 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 CNPY4Q8N129 248 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 STK40Q8N2I9 435 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 ACVR1CQ8NER5 493 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 GPR150Q8NGU9 434 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 TCP10LQ8TDR4 215 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 DENND1AQ8TEH3 1009 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 ATXN2LQ8WWM7 1075 aaKnown RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 PPM1EQ8WY54 764 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 CENPTQ96BT3 561 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 APOPT1Q96IL0 206 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 LRIG1Q96JA1 1093 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 SRPK1Q96SB4 655 aaKnown RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 GPR22Q99680 433 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 OSBPL1AQ9BXW6 950 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 SLC13A1Q9BZW2 595 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZNF395Q9H8N7 513 aaPredicted RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 CAB39LQ9H9S4 337 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZFYVE1Q9HBF4 777 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 FBRSL1Q9HCM7 1045 aaKnown RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZDHHC4Q9NPG8 344 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 SNX15Q9NRS6 342 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 CATSPERZQ9NTU4 200 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 PSD3Q9NYI0 1048 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 IL17CQ9P0M4 197 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 THAP10Q9P2Z0 257 aaPredicted RBP9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 HCN2Q9UL51 889 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 PPIL1Q9Y3C6 166 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 PKP3Q9Y446 797 aa9.92□□□□□ -0.82
SOX2-OT-244ENST00000627738 MUC22E2RYF6 1773 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 FAM95CA0A1B0GW59 222 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 TSPAN11A1L157 253 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 CAPN5O15484 640 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 SHOX2O60902 331 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZWINTO95229 277 aa9.91□□□□□ -0.82
SOX2-OT-244ENST00000627738 PRSS56P0CW18 603 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms