RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 TMEM45AQ9NWC5 275 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 TMEM181Q9P2C4 612 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 ABCD2Q9UBJ2 740 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 IPO11Q9UI26 975 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 TBKBP1A7MCY6 615 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 UBFD1O14562 309 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 SCAMP3O14828 347 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 AURKAO14965 403 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 SYN3O14994 580 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 VNN2O95498 520 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 PRR35P0CG20 571 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 SOX11P35716 441 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 GRIA2P42262 883 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 MAPKAPK2P49137 400 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 APOFQ13790 326 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 PARP15Q460N3 678 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 ZNF789Q5FWF6 425 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 COQ5Q5HYK3 327 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 ZNF678Q5SXM1 525 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.17□□□□□ -1.268e-7■■■□□ 15.6
CTNNA1-244ENST00000627109 ISCA2Q86U28 154 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 RTN4RL1Q86UN2 441 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 ST13P4Q8IZP2 240 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 CRIPAKQ8N1N5 446 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 ICA1LQ8NDH6 482 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 LINC01599Q8WXQ3 324 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 PPWD1Q96BP3 646 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 PABPC5Q96DU9 382 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 FEM1CQ96JP0 617 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 FBXO44Q9H4M3 255 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 POMKQ9H5K3 350 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 EFCAB1Q9HAE3 211 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 NT5C1B-RDH14C9J2C7 533 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 TRIM38O00635 465 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 MSI1O43347 362 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 DNAJA2O60884 412 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 XRCC1P18887 633 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 OGNP20774 298 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 ALDH1A3P47895 512 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 NAA20P61599 178 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 SERINC3Q13530 473 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 LAMB3Q13751 1172 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 FXNQ16595 210 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 FAM83EQ2M2I3 478 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 HECTD2Q5U5R9 776 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 AGAP9Q5VTM2 703 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 ZNF470Q6ECI4 717 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 GLB1LQ6UWU2 654 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 NUP93Q8N1F7 819 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 RCN3Q96D15 328 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 BTN2A3PQ96KV6 586 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 ASB2Q96Q27 587 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 GCNAQ96QF7 691 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 WDR41Q9HAD4 459 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 EML4Q9HC35 981 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 MRPL40Q9NQ50 206 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 CXXC1Q9P0U4 656 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 BCAP29Q9UHQ4 241 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 TBX21Q9UL17 535 aa7.17□□□□□ -1.26
CTNNA1-244ENST00000627109 TLL1O43897 1013 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 CD1DP15813 335 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 GRIK1P39086 918 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 PBX3P40426 434 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 YBEYP58557 167 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 FLOT2Q14254 428 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 CSHL1Q14406 222 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 MBTPS1Q14703 1052 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 SETMARQ53H47 684 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 SIRPB2Q5JXA9 342 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 CLLU1OSQ5K130 101 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 C6orf10Q5SRN2 563 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 C9orf50Q5SZB4 431 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 ZNF549Q6P9A3 640 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 SPATA2LQ8IUW3 424 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 MFN1Q8IWA4 741 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 GABPB2Q8TAK5 448 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 ANKRD49Q8WVL7 239 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 JPH3Q8WXH2 748 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 HMCESQ96FZ2 354 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 KLHL32Q96NJ5 620 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 CDRT15Q96T59 188 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 FAM126AQ9BYI3 521 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 OLA1Q9NTK5 396 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 CACNA2D2Q9NY47 1150 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 TRIM64A6NGJ6 449 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 PITPNM1O00562 1244 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 PRAMEF11O60813 436 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 KATNA1O75449 491 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 MATN4O95460 622 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 HMBSP08397 361 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 HAPLN1P10915 354 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 ATP6V1B1P15313 513 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 ME2P23368 584 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 GATMP50440 423 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 CDKN2DP55273 166 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 MRPS22P82650 360 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 YWHAHQ04917 246 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 MAPRE2Q15555 327 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 KANK2Q63ZY3 851 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms