RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 ZNF175Q9Y473 711 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 CSNK1G3Q9Y6M4 447 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 KAT6AQ92794 2004 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 CXorf49A8MYA2 514 aaPredicted RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 APOC4-APOC2K7ER74 178 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 TOR1AO14656 332 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 TRIM24O15164 1050 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 NCAM2O15394 837 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ARHGEF9O43307 516 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 PI15O43692 258 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ZNF780AO75290 641 aaPredicted RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 PRKD3O94806 890 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 OR5F1O95221 314 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 TRUB2O95900 331 aaKnown RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 APOC2P02655 101 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ALBP02768 609 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 PRKCBP05771 671 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 KRT7P08729 469 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 FCGR1AP12314 374 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 SPNP16150 400 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 HTR1BP28222 390 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 EVI2BP34910 448 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 MSX2P35548 267 aaPredicted RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 UGT2B10P36537 528 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 HAAOP46952 286 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ATXN3P54252 364 aaPredicted RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 OAZ1P54368 228 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 YWHAZP63104 245 aaKnown RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 POLD3Q15054 466 aaPredicted RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 DALRD3Q5D0E6 543 aaKnown RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 GRTP1Q5TC63 336 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 KCNT2Q6UVM3 1135 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ZPBP2Q6X784 338 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 LIX1LQ8IVB5 337 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 THNSL1Q8IYQ7 743 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 RNF148Q8N7C7 305 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 KIAA1958Q8N8K9 716 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 KCTD6Q8NC69 237 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ZSCAN18Q8TBC5 510 aaPredicted RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 DYNC2LI1Q8TCX1 351 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 SECISBP2Q96T21 854 aaKnown RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 BTBD2Q9BX70 525 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 UNC93B1Q9H1C4 597 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 R3HDMLQ9H3Y0 253 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 COG4Q9H9E3 785 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ZC4H2Q9NQZ6 224 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 SMYD2Q9NRG4 433 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 MRPL39Q9NYK5 338 aaKnown RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 HACL1Q9UJ83 578 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ANAPC2Q9UJX6 822 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 GMEB2Q9UKD1 530 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 BAG5Q9UL15 447 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 AUP1Q9Y679 476 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 A0A0G2JMZ2 1700 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 LRRC37A2A6NM11 1700 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 A0A0B4J203 849 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 PCP4L1A6NKN8 68 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ZBTB42B2RXF5 422 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 E7ENX8 843 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 TOR1BO14657 336 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 OGTO15294 1046 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 PLIN3O60664 434 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 H2AFYO75367 372 aaKnown RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 MAFO75444 373 aaPredicted RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 TIPRLO75663 272 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 MICAL2O94851 1124 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 OLFM2O95897 454 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 NFICP08651 508 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 CXCL8P10145 99 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 STMN1P16949 149 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ICAM3P32942 547 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 TRIM23P36406 574 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 GRIA1P42261 906 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ZNF280AP59817 542 aaPredicted RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 PSME3P61289 254 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 YWHAEP62258 255 aaKnown RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ADARB1P78563 741 aaKnown RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ROR1Q01973 937 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 SCRN3Q0VDG4 424 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 LAMTOR4Q0VGL1 99 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 SLC10A2Q12908 348 aaPredicted RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 GRM1Q13255 1194 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 BMPR2Q13873 1038 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 NOMO1Q15155 1222 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 DUOXA2Q1HG44 320 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 SLC9B1Q4ZJI4 515 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 CYBRD1Q53TN4 286 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 VWA5B1Q5TIE3 1220 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 PNCKQ6P2M8 343 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 FIP1L1Q6UN15 594 aaKnown RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 GATAD2AQ86YP4 633 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ADGRF2Q8IZF7 708 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 OFCC1Q8IZS5 231 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 RNF149Q8NC42 400 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 OR2T34Q8NGX1 318 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 OR2T3Q8NH03 318 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 SPATA18Q8TC71 538 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 ZFAND1Q8TCF1 268 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 BLOC1S5Q8TDH9 187 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms