RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 NTAN1Q96AB6 310 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 TAAR9Q96RI9 348 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 TUBGCP5Q96RT8 1024 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 EIF3CQ99613 913 aaKnown RBP7.84□□□□□ -1.15
CLK1-215ENST00000621181 C11orf70Q9BRQ4 267 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 ATP13A3Q9H7F0 1226 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 CATSPERBQ9H7T0 1116 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 TUBD1Q9UJT1 453 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 MYO6Q9UM54 1294 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 SIK3Q9Y2K2 1263 aa7.84□□□□□ -1.15
CLK1-215ENST00000621181 SPTBN1Q01082 2364 aaKnown RBP7.83□□□□□ -1.16
CLK1-215ENST00000621181 IGHV5-10-1A0A0J9YXX1 117 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 B4GAT1O43505 415 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 LCA5LO95447 670 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 FGF3P11487 239 aaPredicted RBP7.83□□□□□ -1.16
CLK1-215ENST00000621181 KRT3P12035 628 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 CCNB1P14635 433 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 LIFP15018 202 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 CSTF2P33240 577 aaKnown RBP eCLIP7.83□□□□□ -1.16
CLK1-215ENST00000621181 UGT1A3P35503 534 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 TRIM23P36406 574 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 CASRP41180 1078 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 PPM1FP49593 454 aaPredicted RBP7.83□□□□□ -1.16
CLK1-215ENST00000621181 VSNL1P62760 191 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 B4GALNT1Q00973 533 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 CYTH1Q15438 398 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 SCYL2Q6P3W7 929 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 LIPIQ6XZB0 460 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 ZSWIM9Q86XI8 627 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 FAM129CQ86XR2 697 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 CCDC170Q8IYT3 715 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 AGBL5Q8NDL9 886 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 ZDHHC1Q8WTX9 485 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 SLC20A1Q8WUM9 679 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 CCDC74BQ96LY2 380 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 CATSPER2Q96P56 530 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 SELENOOQ9BVL4 669 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 LGR4Q9BXB1 951 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 GSDMCQ9BYG8 508 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 LACRTQ9GZZ8 138 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 CARS2Q9HA77 564 aaKnown RBP7.83□□□□□ -1.16
CLK1-215ENST00000621181 SPATS2LQ9NUQ6 558 aaKnown RBP7.83□□□□□ -1.16
CLK1-215ENST00000621181 DONSONQ9NYP3 566 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 B3GALT1Q9Y5Z6 326 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 NOTCH2Q04721 2471 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 TEX15Q9BXT5 2789 aa7.83□□□□□ -1.16
CLK1-215ENST00000621181 CTAGE15A4D2H0 777 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 CFAP69A5D8W1 941 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 ZNF891A8MT65 544 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 A8MX80 341 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 BUB1BO60566 1050 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 PALMO75781 387 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 GFPT2O94808 682 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 ECEL1O95672 775 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 TUBBP07437 444 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 CTAGE8P0CG41 777 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 GP1BBP13224 206 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 RFC1P35251 1148 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 STAT1P42224 750 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 NSFP46459 744 aaKnown RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 POLR2LP62875 67 aaKnown RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 BCL2L1Q07817 233 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 RALGDSQ12967 914 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 ACOX1Q15067 660 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 IGFBP7Q16270 282 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 CLPPQ16740 277 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 DPY19L2P1Q6NXN4 242 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 PNCKQ6P2M8 343 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 SLC30A9Q6PML9 568 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 CTAGE6Q86UF2 777 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 ZNF677Q86XU0 584 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 SPNS2Q8IVW8 549 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 CTAGE4Q8IX94 777 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 CACNA2D3Q8IZS8 1091 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 UMODL1-AS1Q8N2C9 162 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 TSEN2Q8NCE0 465 aaKnown RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 OR4D9Q8NGE8 314 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 C9orf43Q8TAL5 461 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 CENPIQ92674 756 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 PMEPA1Q969W9 287 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 IQCDQ96DY2 449 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 STK33Q9BYT3 514 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 ASPSCR1Q9BZE9 553 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 ZNF71Q9NQZ8 489 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 PSD3Q9NYI0 1048 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 TAAR2Q9P1P5 351 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 ANAPC2Q9UJX6 822 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 TFR2Q9UP52 801 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 PCDHGA3Q9Y5H0 932 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 RP1L1Q8IWN7 2480 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 USP9YO00507 2555 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 ANKRD62A6NC57 917 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 GOLGA6CA6NDK9 693 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 GOLGA6BA6NDN3 693 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 J3KR12 359 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 FGF10O15520 208 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 CYP1A1P04798 512 aaPredicted RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 ATP1A1P05023 1023 aaKnown RBP7.82□□□□□ -1.16
CLK1-215ENST00000621181 FGF1P05230 155 aa7.82□□□□□ -1.16
CLK1-215ENST00000621181 HOXC4P09017 264 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms