RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 HLA-FP30511 346 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 STC1P52823 247 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 GEN1Q17RS7 908 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 LRRC23Q53EV4 343 aaPredicted RBP9.92□□□□□ -0.82
VTA1-205ENST00000620996 ARL13AQ5H913 290 aaPredicted RBP9.92□□□□□ -0.82
VTA1-205ENST00000620996 PSAPL1Q6NUJ1 521 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 LONP2Q86WA8 852 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 GPR65Q8IYL9 337 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 ACDQ96AP0 544 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 NSL1Q96IY1 281 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 ZSWIM3Q96MP5 696 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 MRPL57Q9BQC6 102 aaKnown RBP9.92□□□□□ -0.82
VTA1-205ENST00000620996 CIPCQ9C0C6 399 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 ATP13A3Q9H7F0 1226 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 IGSF5Q9NSI5 407 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 hCG_2014768A0A024R1R8 64 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 PFDN6O15212 129 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 CLASP2O75122 1294 aaKnown RBP9.91□□□□□ -0.82
VTA1-205ENST00000620996 TYRP14679 529 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 CEBPBP17676 345 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 POLD2P49005 469 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 AP1S1P61966 158 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 GPM6BQ13491 265 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 POM121L1PQ3SYA9 428 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 LY6G5CQ5SRR4 150 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 C9orf50Q5SZB4 431 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 ZNF549Q6P9A3 640 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 TXNDC5Q8NBS9 432 aaKnown RBP9.91□□□□□ -0.82
VTA1-205ENST00000620996 RDH11Q8TC12 318 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 MCUR1Q96AQ8 359 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 ERLEC1Q96DZ1 483 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 ALG14Q96F25 216 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 MMADHCQ9H3L0 296 aaPredicted RBP9.91□□□□□ -0.82
VTA1-205ENST00000620996 IGFLR1Q9H665 355 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 COG4Q9H9E3 785 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 INTS6Q9UL03 887 aaKnown RBP9.91□□□□□ -0.82
VTA1-205ENST00000620996 PLXNA4Q9HCM2 1894 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 PTPRSQ13332 1948 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 NCF1BA6NI72 391 aaPredicted RBP9.91□□□□□ -0.82
VTA1-205ENST00000620996 NCF1CA8MVU1 366 aaPredicted RBP9.91□□□□□ -0.82
VTA1-205ENST00000620996 GYG2O15488 501 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 ZBTB14O43829 449 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 CCDC22O60826 627 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 RASSF9O75901 435 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 IL1BP01584 269 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 SBK3P0C264 359 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 NCF1P14598 390 aaPredicted RBP9.91□□□□□ -0.82
VTA1-205ENST00000620996 ELF3P78545 371 aaPredicted RBP9.91□□□□□ -0.82
VTA1-205ENST00000620996 ASPHQ12797 758 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 FUT11Q495W5 492 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 FBXO48Q5FWF7 155 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 DGKKQ5KSL6 1271 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 TRIM67Q6ZTA4 783 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 LMNTD2Q8IXW0 634 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 PIANPQ8IYJ0 282 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 CPXM2Q8N436 756 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 FIBINQ8TAL6 211 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 SORCS1Q8WY21 1168 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 SMG7Q92540 1137 aaKnown RBP9.91□□□□□ -0.82
VTA1-205ENST00000620996 ASIC4Q96FT7 647 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 RAB3IPQ96QF0 476 aaPredicted RBP9.91□□□□□ -0.82
VTA1-205ENST00000620996 NUF2Q9BZD4 464 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 CDH19Q9H159 772 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 ABCG8Q9H221 673 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 NCKIPSDQ9NZQ3 722 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 LZTS1Q9Y250 596 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 PCDHGA4Q9Y5G9 962 aa9.91□□□□□ -0.82
VTA1-205ENST00000620996 TMEM114B3SHH9 223 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.9□□□□□ -0.82
VTA1-205ENST00000620996 H2AFYO75367 372 aaKnown RBP9.9□□□□□ -0.82
VTA1-205ENST00000620996 PGLSO95336 258 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 CLDN7O95471 211 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 UGT2B4P06133 528 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 GFAPP14136 432 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 ATP5F1P24539 256 aaPredicted RBP9.9□□□□□ -0.82
VTA1-205ENST00000620996 SERPINA4P29622 427 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 IDH3AP50213 366 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 POLE2P56282 527 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 SH2D4BQ5SQS7 431 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 POU5F2Q8N7G0 328 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 CYB5D2Q8WUJ1 264 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 WDR55Q9H6Y2 383 aaPredicted RBP9.9□□□□□ -0.82
VTA1-205ENST00000620996 SLCO3A1Q9UIG8 710 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 RWDD3Q9Y3V2 267 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 CDH23Q9H251 3354 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 MEI4A8MW99 385 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 PRR5-ARHGAP8B1AHC4 643 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 TMEM233B4DJY2 109 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 SUPT3HB4E1H0 165 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 NIPSNAP2O75323 286 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 SUPT3HO75486 399 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 SUPT7LO94864 414 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 RBP1P09455 135 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 T-ENOLP0DO92 83 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 SRCP12931 536 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 OGNP20774 298 aaKnown RBP9.9□□□□□ -0.82
VTA1-205ENST00000620996 RECQLP46063 649 aaPredicted RBP9.9□□□□□ -0.82
VTA1-205ENST00000620996 SNRPD1P62314 119 aaKnown RBP9.9□□□□□ -0.82
VTA1-205ENST00000620996 ARHGAP8P85298 464 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 HSF5Q4G112 596 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms