RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.88□□□□□ -0.51
UPF3B-204ENST00000619445 MATN3O15232 486 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 FZD6O60353 706 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 TRBC1P01850 177 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 FGF1P05230 155 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 SFTPCP11686 197 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 LHCGRP22888 699 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 GNPDA1P46926 289 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 GPLD1P80108 840 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 FANCCQ00597 558 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 B4GALNT1Q00973 533 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 PAFAH1B3Q15102 231 aaKnown RBP11.88□□□□□ -0.51
UPF3B-204ENST00000619445 NFKBIBQ15653 356 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 PHF19Q5T6S3 580 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 DENND2CQ68D51 928 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 PCSK4Q6UW60 755 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 USP53Q70EK8 1073 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 HSD11B1LQ7Z5J1 315 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 TECPR1Q7Z6L1 1165 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 TP53INP2Q8IXH6 220 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 AVL9Q8NBF6 648 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 KCTD6Q8NC69 237 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 EXD1Q8NHP7 514 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 PIH1D2Q8WWB5 315 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 MAML1Q92585 1016 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 SGF29Q96ES7 293 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 OR2M4Q96R27 311 aa11.88□□□□□ -0.51
UPF3B-204ENST00000619445 STN1Q9H668 368 aaKnown RBP11.88□□□□□ -0.51
UPF3B-204ENST00000619445 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.88□□□□□ -0.511e-6■■■■□ 19.8
UPF3B-204ENST00000619445 SETXQ7Z333 2677 aaKnown RBP11.88□□□□□ -0.51
UPF3B-204ENST00000619445 A0A087X0T9 212 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 RGSL1A5PLK6 1076 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 H2AFZP0C0S5 128 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 FAM228BP0C875 321 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 PLA2G2AP14555 144 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 SLC2A4P14672 509 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 PTMSP20962 102 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 ALDH4A1P30038 563 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 ADCY8P40145 1251 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 PBX1P40424 430 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 MAXP61244 160 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 CTBSQ01459 385 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 MANEAQ5SRI9 462 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 LRRC66Q68CR7 880 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 KCTD16Q68DU8 428 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 H2AFVQ71UI9 128 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 VSIG1Q86XK7 387 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 GALNT13Q8IUC8 556 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 OR4D9Q8NGE8 314 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 CCL4L1Q8NHW4 92 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 ZNF564Q8TBZ8 553 aaPredicted RBP11.87□□□□□ -0.51
UPF3B-204ENST00000619445 CTNNBL1Q8WYA6 563 aaPredicted RBP11.87□□□□□ -0.51
UPF3B-204ENST00000619445 NSMCE3Q96MG7 304 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 LYSMD1Q96S90 227 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 FUCA2Q9BTY2 467 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 RMI1Q9H9A7 625 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 SPATS2LQ9NUQ6 558 aaKnown RBP11.87□□□□□ -0.51
UPF3B-204ENST00000619445 VPS18Q9P253 973 aa11.87□□□□□ -0.51
UPF3B-204ENST00000619445 ASH1LQ9NR48 2969 aaKnown RBP11.86□□□□□ -0.51
UPF3B-204ENST00000619445 ZNF487B1APH4 448 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 B8ZZF3 427 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 STMND1H3BQB6 276 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 J3QKU1 62 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 PROSCO94903 275 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 ECEL1O95672 775 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 TCF4P15884 667 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 IL4RP24394 825 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 MAN1A1P33908 653 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 ACTR1BP42025 376 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 FASLGP48023 281 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 ATP1A2P50993 1020 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 STC1P52823 247 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 ACTR1AP61163 376 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 DPYSL3Q14195 570 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 ANKRD20A8PQ5CZ79 823 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 TXNRD3NBQ6F5E7 133 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 SLC30A9Q6PML9 568 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 NRROSQ86YC3 692 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 PELI3Q8N2H9 469 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 AGBL5Q8NDL9 886 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 CCHCR1Q8TD31 782 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 SH3KBP1Q96B97 665 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 HDAC11Q96DB2 347 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 TAAR9Q96RI9 348 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 TDRD1Q9BXT4 1180 aaKnown RBP11.86□□□□□ -0.51
UPF3B-204ENST00000619445 ADGRE3Q9BY15 652 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 ASPSCR1Q9BZE9 553 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 ABCG8Q9H221 673 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 CBX8Q9HC52 389 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 RBM22Q9NW64 420 aaKnown RBP eCLIP11.86□□□□□ -0.51
UPF3B-204ENST00000619445 CTTNBP2NLQ9P2B4 639 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 PCDHGA3Q9Y5H0 932 aa11.86□□□□□ -0.51
UPF3B-204ENST00000619445 TTC24A2A3L6 582 aaPredicted RBP11.85□□□□□ -0.51
UPF3B-204ENST00000619445 PMS2P1A4D2B8 440 aa11.85□□□□□ -0.51
UPF3B-204ENST00000619445 B4GAT1O43505 415 aa11.85□□□□□ -0.51
UPF3B-204ENST00000619445 MFSD11O43934 449 aa11.85□□□□□ -0.51
UPF3B-204ENST00000619445 HGFP14210 728 aa11.85□□□□□ -0.51
UPF3B-204ENST00000619445 CTPS1P17812 591 aa11.85□□□□□ -0.51
UPF3B-204ENST00000619445 HNRNPH3P31942 346 aaKnown RBP11.85□□□□□ -0.51
UPF3B-204ENST00000619445 CSTF2P33240 577 aaKnown RBP eCLIP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms