RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 EPORP19235 508 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 POLR2JP52435 117 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 CDC42P60953 191 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 AP1S1P61966 158 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 BICRALQ6AI39 1079 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 PMF1Q6P1K2 205 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 OLFML1Q6UWY5 402 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SLC30A8Q8IWU4 369 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ZNF384Q8TF68 577 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 MRPS31Q92665 395 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 PPP1R16AQ96I34 528 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 FAM84AQ96KN4 292 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 ZNF347Q96SE7 839 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 SLITRK2Q9H156 845 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 PRDM12Q9H4Q4 367 aa3.06□□□□□ -1.92
LPP-221ENST00000618621 TUT1Q9H6E5 874 aaKnown RBP3.06□□□□□ -1.92
LPP-221ENST00000618621 MYH11P35749 1972 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 E5RJQ4 531 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 MATN2O00339 956 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 BTN3A1O00481 513 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 MRPS22P82650 360 aaKnown RBP3.05□□□□□ -1.92
LPP-221ENST00000618621 C9orf57Q5W0N0 161 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 TATDN1Q6P1N9 297 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 MACC1Q6ZN28 852 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 PGBD3Q8N328 593 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 RPRD1BQ9NQG5 326 aaKnown RBP3.05□□□□□ -1.92
LPP-221ENST00000618621 DPP7Q9UHL4 492 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 TIMM13Q9Y5L4 95 aaPredicted RBP3.05□□□□□ -1.92
LPP-221ENST00000618621 ABCA6Q8N139 1617 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 PXDNQ92626 1479 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 KCNK1O00180 336 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 PLIN3O60664 434 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 COX7A2P14406 83 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 PTX3P26022 381 aaPredicted RBP3.05□□□□□ -1.92
LPP-221ENST00000618621 ALDH6A1Q02252 535 aaKnown RBP3.05□□□□□ -1.92
LPP-221ENST00000618621 ESPL1Q14674 2120 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 C5orf22Q49AR2 442 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 FBXO43Q4G163 708 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 CDH24Q86UP0 819 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 PNPT1Q8TCS8 783 aaKnown RBP3.05□□□□□ -1.92
LPP-221ENST00000618621 PHF12Q96QT6 1004 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 HAPLN3Q96S86 360 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 NPAS2Q99743 824 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 PDCD10Q9BUL8 212 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 PIH1D1Q9NWS0 290 aaKnown RBP3.05□□□□□ -1.92
LPP-221ENST00000618621 GIN1Q9NXP7 522 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 ADGRE2Q9UHX3 823 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 VPS4AQ9UN37 437 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 SNX7Q9UNH6 387 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 GMEB1Q9Y692 573 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 GLI2P10070 1586 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 RIC1Q4ADV7 1423 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 A0A1W2PRQ8 180 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 ANKDD1BA6NHY2 528 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 KLF11O14901 512 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 FAM155BO75949 473 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 PABPC4LP0CB38 370 aaKnown RBP3.05□□□□□ -1.92
LPP-221ENST00000618621 TGFBR2P37173 567 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 MAPK9P45984 424 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 COL19A1Q14993 1142 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 ZNF423Q2M1K9 1284 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 ZIK1Q3SY52 487 aaPredicted RBP3.05□□□□□ -1.92
LPP-221ENST00000618621 MSS51Q4VC12 460 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 IRAK1BP1Q5VVH5 260 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 CDCA2Q69YH5 1023 aaPredicted RBP3.05□□□□□ -1.92
LPP-221ENST00000618621 HEXDCQ8WVB3 486 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 EDEM1Q92611 657 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 UPF1Q92900 1129 aaKnown RBP eCLIP3.05□□□□□ -1.92
LPP-221ENST00000618621 USP7Q93009 1102 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 CRELD1Q96HD1 420 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 UROC1Q96N76 676 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 SLC38A2Q96QD8 506 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 FNDC11Q9BVV2 318 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 ABCB10Q9NRK6 738 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 SLC25A13Q9UJS0 675 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 DISP2A7MBM2 1401 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 C2CD4BA6NLJ0 364 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 PAPSS1O43252 624 aaPredicted RBP3.05□□□□□ -1.92
LPP-221ENST00000618621 AP2A1O95782 977 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 S100A1P23297 94 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 CBX3Q13185 183 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 SP140Q13342 867 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 QPRTQ15274 297 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 GALNT18Q6P9A2 607 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 CERS6Q6ZMG9 384 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 ZCCHC23Q6ZST2 131 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 NEK10Q6ZWH5 1172 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 C16orf62Q7Z3J2 963 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 UXS1Q8NBZ7 420 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 ZNF671Q8TAW3 534 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 CLEC4MQ9H2X3 399 aaPredicted RBP3.05□□□□□ -1.92
LPP-221ENST00000618621 EHD1Q9H4M9 534 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 EBF3Q9H4W6 596 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.05□□□□□ -1.927e-6■□□□□ 8.5
LPP-221ENST00000618621 SEC14L5O43304 696 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 ENDOD1O94919 500 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 HIST1H2ABP04908 130 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 PRKAR2AP13861 404 aaKnown RBP3.05□□□□□ -1.92
LPP-221ENST00000618621 MPSTP25325 297 aa3.05□□□□□ -1.92
LPP-221ENST00000618621 RORCP51449 518 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms