RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 HK3P52790 923 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 SRP54P61011 504 aaKnown RBP15.96■□□□□ 0.15
BRCA1-228ENST00000618469 OTUD4Q01804 1114 aaKnown RBP15.96■□□□□ 0.15
BRCA1-228ENST00000618469 WASHC5Q12768 1159 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 SMAD1Q15797 465 aaKnown RBP15.96■□□□□ 0.15
BRCA1-228ENST00000618469 QPCTQ16769 361 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 KCTD16Q68DU8 428 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 RFLNAQ6ZTI6 216 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 KDELC2Q7Z4H8 507 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 ZNF843Q8N446 348 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 SPATA22Q8NHS9 363 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 ACTL9Q8TC94 416 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 HTR3CQ8WXA8 447 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 APOLD1Q96LR9 279 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 TEKT5Q96M29 485 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 TBATAQ96M53 351 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 FCRL3Q96P31 734 aaPredicted RBP15.96■□□□□ 0.15
BRCA1-228ENST00000618469 TSGA10Q9BZW7 698 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 PRORYQ9H606 182 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 FGF22Q9HCT0 170 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 AK5Q9Y6K8 562 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 CSNK1G3Q9Y6M4 447 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 KALRNO60229 2985 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 TMEM202A6NGA9 273 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 MIF4GDA9UHW6 222 aaKnown RBP15.95■□□□□ 0.14
BRCA1-228ENST00000618469 PMPCBO75439 489 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 GCATO75600 419 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 CLDN7O95471 211 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 PTMAP06454 111 aaKnown RBP15.95■□□□□ 0.14
BRCA1-228ENST00000618469 PYGMP11217 842 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 MYCLP1P12525 358 aaPredicted RBP15.95■□□□□ 0.14
BRCA1-228ENST00000618469 MYF5P13349 255 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 CTSEP14091 401 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 STC1P52823 247 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 SLC14A2Q15849 920 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 ZCCHC8Q6NZY4 707 aaKnown RBP15.95■□□□□ 0.14
BRCA1-228ENST00000618469 TECPR1Q7Z6L1 1165 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 OR56A4Q8NGH8 313 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 OR1E3Q8WZA6 343 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 AP2M1Q96CW1 435 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 TRIB3Q96RU7 358 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 LYSMD1Q96S90 227 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 FAM118BQ9BPY3 351 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 MLPHQ9BV36 600 aaPredicted RBP15.95■□□□□ 0.14
BRCA1-228ENST00000618469 LGR4Q9BXB1 951 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 C10orf88Q9H8K7 445 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 PHPT1Q9NRX4 125 aaPredicted RBP15.95■□□□□ 0.14
BRCA1-228ENST00000618469 UBP1Q9NZI7 540 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 MOSPD1Q9UJG1 213 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 GUCA1BQ9UMX6 200 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 DOLKQ9UPQ8 538 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 EFR3BQ9Y2G0 817 aa15.95■□□□□ 0.14
BRCA1-228ENST00000618469 PTPRQQ9UMZ3 2332 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 ANKRD66B4E2M5 251 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 LMO7DNF2Z398 122 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 KRT86O43790 486 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 TJP3O95049 919 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 ANXA6P08133 673 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 PIRTP0C851 137 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 JUPP14923 745 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 ACP1P24666 158 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 RBL1P28749 1068 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 CD68P34810 354 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-228ENST00000618469 TRIM23P36406 574 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 GPR1P46091 355 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 CDK3Q00526 305 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 PTSQ03393 145 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 CDK18Q07002 472 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 XRCC4Q13426 336 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 ELOCQ15369 112 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 LYSMD3Q7Z3D4 306 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 CDKL3Q8IVW4 592 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-228ENST00000618469 ZNF567Q8N184 647 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 CBARPQ8N350 705 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-228ENST00000618469 FSTL5Q8N475 847 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-228ENST00000618469 SCAMP4Q969E2 229 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 TADA1Q96BN2 335 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 VAT1Q99536 393 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 CLPBQ9H078 707 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 ABCG8Q9H221 673 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 SUDS3Q9H7L9 328 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-228ENST00000618469 MRPL40Q9NQ50 206 aaKnown RBP15.94■□□□□ 0.14
BRCA1-228ENST00000618469 EVA1BQ9NVM1 165 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 RSPH14Q9UHP6 348 aa15.94■□□□□ 0.14
BRCA1-228ENST00000618469 SCN8AQ9UQD0 1980 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 LY6G6EA0A0G2JKS1 128 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 PRSS38A1L453 326 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 PDE2AO00408 941 aaPredicted RBP15.93■□□□□ 0.14
BRCA1-228ENST00000618469 TPP1O14773 563 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 DDX3YO15523 660 aaKnown RBP15.93■□□□□ 0.14
BRCA1-228ENST00000618469 SOD1P00441 154 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 HOXC4P09017 264 aaPredicted RBP15.93■□□□□ 0.14
BRCA1-228ENST00000618469 CKMT1AP12532 417 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 EIF3EP60228 445 aaKnown RBP15.93■□□□□ 0.14
BRCA1-228ENST00000618469 DPTQ07507 201 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 ILKQ13418 452 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 DOK6Q6PKX4 331 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 LRRC69Q6ZNQ3 347 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 ZNF765Q7L2R6 523 aa15.93■□□□□ 0.14
BRCA1-228ENST00000618469 PID1Q7Z2X4 250 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms