RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 MUSKO15146 869 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 KATNA1O75449 491 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 CHRNA1P02708 482 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 PIM1P11309 404 aaPredicted RBP14.02□□□□□ -0.16
COL6A1-207ENST00000612273 GPX3P22352 226 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 PSMA4P25789 261 aaKnown RBP14.02□□□□□ -0.16
COL6A1-207ENST00000612273 POLD3Q15054 466 aaPredicted RBP14.02□□□□□ -0.16
COL6A1-207ENST00000612273 GDF6Q6KF10 455 aaPredicted RBP14.02□□□□□ -0.16
COL6A1-207ENST00000612273 KDELC1Q6UW63 502 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 GPR141Q7Z602 305 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 ANKRD23Q86SG2 305 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 CDYL2Q8N8U2 506 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 PPM1MQ96MI6 270 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 TCF12Q99081 682 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 ADI1Q9BV57 179 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 SLC2A11Q9BYW1 496 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 SLC25A51Q9H1U9 297 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 POLR1BQ9H9Y6 1135 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 PNPLA3Q9NST1 481 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 GMIPQ9P107 970 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 TMEM181Q9P2C4 612 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 CD300AQ9UGN4 299 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 IKZF3Q9UKT9 509 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 PADI3Q9ULW8 664 aa14.02□□□□□ -0.16
COL6A1-207ENST00000612273 IQCF5A8MTL0 148 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 CD3EAPO15446 510 aaKnown RBP14.02□□□□□ -0.17
COL6A1-207ENST00000612273 C8BP07358 591 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 OR1E1P30953 314 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 MLLT6P55198 1093 aaPredicted RBP14.02□□□□□ -0.17
COL6A1-207ENST00000612273 UFM1P61960 85 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 ADAM17P78536 824 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 MRPS6P82932 125 aaKnown RBP14.02□□□□□ -0.17
COL6A1-207ENST00000612273 DCTN2Q13561 401 aaKnown RBP14.02□□□□□ -0.17
COL6A1-207ENST00000612273 LPIN1Q14693 890 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 RBBP7Q16576 425 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 UGT3A2Q3SY77 523 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 PAGE3Q5JUK9 113 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 FAM43BQ6ZT52 329 aaPredicted RBP14.02□□□□□ -0.17
COL6A1-207ENST00000612273 RAB44Q7Z6P3 723 aaPredicted RBP14.02□□□□□ -0.17
COL6A1-207ENST00000612273 CARM1Q86X55 608 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 PGBD5Q8N414 524 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 KLHDC9Q8NEP7 349 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 CCDC126Q96EE4 140 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 UBXN10Q96LJ8 280 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 INTS7Q9NVH2 962 aaKnown RBP14.02□□□□□ -0.17
COL6A1-207ENST00000612273 POLG2Q9UHN1 485 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 DOLKQ9UPQ8 538 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 PHF24Q9UPV7 400 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 BTN3A1O00481 513 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 ARPC2O15144 300 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 SNAP29O95721 258 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 ITGB6P18564 788 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 FASP25445 335 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 LEPRP48357 1165 aaKnown RBP14.02□□□□□ -0.17
COL6A1-207ENST00000612273 TBX4P57082 545 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 ESRRGP62508 458 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 HERVK_113P63132 956 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 CTBSQ01459 385 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 ZNF235Q14590 738 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 C10orf120Q5SQS8 335 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 TIGD7Q6NT04 549 aaPredicted RBP14.02□□□□□ -0.17
COL6A1-207ENST00000612273 SLC22A9Q8IVM8 553 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 PARP8Q8N3A8 854 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 DTNBP1Q96EV8 351 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 ERVK-6Q9BXR3 956 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 PRKD2Q9BZL6 878 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 CCDC68Q9H2F9 335 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 NOD1Q9Y239 953 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 SBF1O95248 1867 aa14.02□□□□□ -0.17
COL6A1-207ENST00000612273 A0A0D9SEW6 157 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 A0A1W2PPW3 197 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 TCRBV3S1A0A5B6 114 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 NPEPPSL1A6NEC2 478 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 SLC22A2O15244 555 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 DNAJB13P59910 316 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 MYBPC3Q14896 1274 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 NHSL2Q5HYW2 709 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 TMEM26Q6ZUK4 368 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 FAR2Q96K12 515 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 PAIP1Q9H074 479 aaKnown RBP14.01□□□□□ -0.17
COL6A1-207ENST00000612273 SLC6A2P23975 617 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 OR1G1P47890 313 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 CPT1AP50416 773 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 IST1P53990 364 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 C18orf21Q32NC0 220 aaPredicted RBP14.01□□□□□ -0.17
COL6A1-207ENST00000612273 FBXL22Q6P050 247 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 KLHL35Q6PF15 583 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 THEM5Q8N1Q8 247 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 FBXO39Q8N4B4 442 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 PDZD8Q8NEN9 1154 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 OR10Q1Q8NGQ4 319 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 C12orf43Q96C57 262 aaKnown RBP14.01□□□□□ -0.17
COL6A1-207ENST00000612273 LRRC58Q96CX6 371 aa14.01□□□□□ -0.17
COL6A1-207ENST00000612273 SLC12A8A0AV02 714 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 OR1I1O60431 355 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 B4GALT3O60512 393 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 CD1DP15813 335 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 HK2P52789 917 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 NRG1Q02297 640 aaPredicted RBP14□□□□□ -0.17
COL6A1-207ENST00000612273 ERMP1Q7Z2K6 904 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms