RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 MAP10Q9P2G4 905 aa11.02□□□□□ -0.64
CDH4-202ENST00000611855 TRIM64CA6NLI5 447 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 ZNF487B1APH4 448 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 TNPO2O14787 897 aaKnown RBP11.02□□□□□ -0.65
CDH4-202ENST00000611855 MSI1O43347 362 aaKnown RBP11.02□□□□□ -0.65
CDH4-202ENST00000611855 YBX3P16989 372 aaKnown RBP eCLIP11.02□□□□□ -0.65
CDH4-202ENST00000611855 HLCSP50747 726 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 TMBIM6P55061 237 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 FOXA1P55317 472 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 ECT2LQ008S8 904 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 PPP1R8Q12972 351 aaKnown RBP11.02□□□□□ -0.65
CDH4-202ENST00000611855 PAFAH1B3Q15102 231 aaKnown RBP11.02□□□□□ -0.65
CDH4-202ENST00000611855 CYBRD1Q53TN4 286 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 USP43Q70EL4 1123 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 ZDHHC17Q8IUH5 632 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 SMG8Q8ND04 991 aaKnown RBP11.02□□□□□ -0.65
CDH4-202ENST00000611855 OR52K2Q8NGK3 314 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 OTUD5Q96G74 571 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 OSBPL10Q9BXB5 764 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 SEZ6LQ9BYH1 1024 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 DNAI2Q9GZS0 605 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 CCM2LQ9NUG4 571 aaPredicted RBP11.02□□□□□ -0.65
CDH4-202ENST00000611855 GDAP2Q9NXN4 497 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 PARP14Q460N5 1801 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 HBP1O60381 514 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 MBL2P11226 248 aaPredicted RBP11.02□□□□□ -0.65
CDH4-202ENST00000611855 CPB1P15086 417 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 SHMT2P34897 504 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 TUFMP49411 452 aaKnown RBP11.02□□□□□ -0.65
CDH4-202ENST00000611855 TKTL1P51854 596 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 TRIM32Q13049 653 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 PYCR3Q53H96 274 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 GADL1Q6ZQY3 521 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 R3HCC1LQ7Z5L2 792 aaKnown RBP11.02□□□□□ -0.65
CDH4-202ENST00000611855 AKAP14Q86UN6 197 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 ANKRD13AQ8IZ07 590 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 MRPL57Q9BQC6 102 aaKnown RBP11.02□□□□□ -0.65
CDH4-202ENST00000611855 ULBP1Q9BZM6 244 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 AKTIPQ9H8T0 292 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 CMTM6Q9NX76 183 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.02□□□□□ -0.65
CDH4-202ENST00000611855 BAG5Q9UL15 447 aa11.02□□□□□ -0.65
CDH4-202ENST00000611855 PNMA8BQ9ULN7 279 aaPredicted RBP11.02□□□□□ -0.65
CDH4-202ENST00000611855 TIMM13Q9Y5L4 95 aaPredicted RBP11.02□□□□□ -0.65
CDH4-202ENST00000611855 TTC24A2A3L6 582 aaPredicted RBP11.01□□□□□ -0.65
CDH4-202ENST00000611855 TAF4O00268 1085 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 ANGPT2O15123 496 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 ARPC2O15144 300 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 IPO13O94829 963 aaKnown RBP11.01□□□□□ -0.65
CDH4-202ENST00000611855 MFN2O95140 757 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 USP17L7P0C7H9 530 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 NPY2RP49146 381 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 DGCR6Q14129 220 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 ZNF773Q6PK81 442 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 LGI2Q8N0V4 545 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 FLAD1Q8NFF5 587 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 ELMO1Q92556 727 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 WNT8BQ93098 351 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 RNF34Q969K3 372 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 EMID1Q96A84 441 aaPredicted RBP11.01□□□□□ -0.65
CDH4-202ENST00000611855 RNF145Q96MT1 663 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 TDRD1Q9BXT4 1180 aaKnown RBP11.01□□□□□ -0.65
CDH4-202ENST00000611855 PLEKHA5Q9HAU0 1116 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 IGSF5Q9NSI5 407 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 DDX28Q9NUL7 540 aaKnown RBP11.01□□□□□ -0.65
CDH4-202ENST00000611855 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.01□□□□□ -0.65
CDH4-202ENST00000611855 ANKMY1Q9P2S6 941 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 FBXO5Q9UKT4 447 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 B3GNT3Q9Y2A9 372 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 OR51F1A6NGY5 319 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 H0Y858 1186 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 AGRPO00253 132 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 SNPHO15079 494 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 GAS2O43903 313 aaKnown RBP11.01□□□□□ -0.65
CDH4-202ENST00000611855 DEAF1O75398 565 aaPredicted RBP11.01□□□□□ -0.65
CDH4-202ENST00000611855 LINC00032P0C843 101 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 GMPSP49915 693 aaPredicted RBP11.01□□□□□ -0.65
CDH4-202ENST00000611855 PPIL2Q13356 520 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 RPS6KA2Q15349 733 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 TMTC4Q5T4D3 741 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 GPR158Q5T848 1215 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 INTS11Q5TA45 600 aaKnown RBP11.01□□□□□ -0.65
CDH4-202ENST00000611855 AGAP7PQ5VUJ5 663 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 RSBN1Q5VWQ0 802 aaPredicted RBP11.01□□□□□ -0.65
CDH4-202ENST00000611855 PKN3Q6P5Z2 889 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 CHST13Q8NET6 341 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 PTCD2Q8WV60 388 aaKnown RBP11.01□□□□□ -0.65
CDH4-202ENST00000611855 NUDT8Q8WV74 236 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 HDAC11Q96DB2 347 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 DACH2Q96NX9 599 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 NSUN5Q96P11 429 aaKnown RBP11.01□□□□□ -0.65
CDH4-202ENST00000611855 NPY6RQ99463 290 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 ADAMTS10Q9H324 1103 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 AGPAT4Q9NRZ5 378 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 SLAMF8Q9P0V8 285 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 TBC1D14Q9P2M4 693 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 CRYL1Q9Y2S2 319 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 TIMM22Q9Y584 194 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 CCDC162PA2VCL2 907 aa11.01□□□□□ -0.65
CDH4-202ENST00000611855 NPHS1O60500 1241 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms