RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 SCAMP4Q969E2 229 aa21.82■■□□□ 1.08
PPFIA3-208ENST00000602726 QKIQ96PU8 341 aaKnown RBP eCLIP21.82■■□□□ 1.08
PPFIA3-208ENST00000602726 OSBPL8Q9BZF1 889 aa21.82■■□□□ 1.08
PPFIA3-208ENST00000602726 KLHL8Q9P2G9 620 aaPredicted RBP21.82■■□□□ 1.08
PPFIA3-208ENST00000602726 AMFRQ9UKV5 643 aa21.82■■□□□ 1.08
PPFIA3-208ENST00000602726 GPR34Q9UPC5 381 aa21.82■■□□□ 1.08
PPFIA3-208ENST00000602726 CLCA2Q9UQC9 943 aa21.82■■□□□ 1.08
PPFIA3-208ENST00000602726 EFR3BQ9Y2G0 817 aa21.82■■□□□ 1.08
PPFIA3-208ENST00000602726 ASXL3Q9C0F0 2248 aa21.82■■□□□ 1.08
PPFIA3-208ENST00000602726 EME2A4GXA9 379 aaPredicted RBP21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 H7C0C1 242 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 MT-CYBP00156 380 aaPredicted RBP21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 PYGLP06737 847 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 ATP5OP48047 213 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 ADAMTSL4Q6UY14 1074 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 PEX26Q7Z412 305 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 TAF8Q7Z7C8 310 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 SYCE1Q8N0S2 351 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 ARL10Q8N8L6 244 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 HTR3CQ8WXA8 447 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 TADA1Q96BN2 335 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 TRIB3Q96RU7 358 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 VAT1Q99536 393 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 RIOK2Q9BVS4 552 aaKnown RBP21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 TMEM168Q9H0V1 697 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 SUDS3Q9H7L9 328 aaPredicted RBP21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 CARS2Q9HA77 564 aaKnown RBP21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 SIRPGQ9P1W8 387 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 TRIM10Q9UDY6 481 aa21.81■■□□□ 1.08
PPFIA3-208ENST00000602726 PMPCBO75439 489 aa21.8■■□□□ 1.08
PPFIA3-208ENST00000602726 MT-CO3P00414 261 aa21.8■■□□□ 1.08
PPFIA3-208ENST00000602726 CEACAM5P06731 702 aa21.8■■□□□ 1.08
PPFIA3-208ENST00000602726 PTPN7P35236 360 aa21.8■■□□□ 1.08
PPFIA3-208ENST00000602726 XRCC4Q13426 336 aa21.8■■□□□ 1.08
PPFIA3-208ENST00000602726 PID1Q7Z2X4 250 aa21.8■■□□□ 1.08
PPFIA3-208ENST00000602726 CACTIN-AS1Q8N1I8 211 aa21.8■■□□□ 1.08
PPFIA3-208ENST00000602726 ALG3Q92685 438 aa21.8■■□□□ 1.08
PPFIA3-208ENST00000602726 NAT6Q93015 286 aa21.8■■□□□ 1.08
PPFIA3-208ENST00000602726 FRMD8Q9BZ67 464 aaPredicted RBP21.8■■□□□ 1.08
PPFIA3-208ENST00000602726 UBP1Q9NZI7 540 aa21.8■■□□□ 1.08
PPFIA3-208ENST00000602726 PKD2L2Q9NZM6 624 aa21.8■■□□□ 1.08
PPFIA3-208ENST00000602726 PADI4Q9UM07 663 aa21.8■■□□□ 1.08
PPFIA3-208ENST00000602726 ANKRD11Q6UB99 2663 aaPredicted RBP21.8■■□□□ 1.08
PPFIA3-208ENST00000602726 FREM2Q5SZK8 3169 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 RGSL1A5PLK6 1076 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 SOD1P00441 154 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 NFKB1P19838 968 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 CD68P34810 354 aaPredicted RBP21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 SPINT3P49223 89 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 NOMO1Q15155 1222 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 DOK6Q6PKX4 331 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 LYSMD3Q7Z3D4 306 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 ZNF567Q8N184 647 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 UBL4BQ8N7F7 174 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 DCBLD1Q8N8Z6 715 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 FAM46DQ8NEK8 389 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 MDM1Q8TC05 714 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 AGAP2Q99490 1192 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 FERMT1Q9BQL6 677 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 HERPUD2Q9BSE4 406 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 FAM83DQ9H4H8 585 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 ZFYVE1Q9HBF4 777 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 FAM153AQ9UHL3 310 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 TRHDEQ9UKU6 1024 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 ACACAQ13085 2346 aa21.79■■□□□ 1.08
PPFIA3-208ENST00000602726 DMXL2Q8TDJ6 3036 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 A0A0U1RQJ8 604 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 TJP3O95049 919 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 NDST3O95803 873 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 CAPNS1P04632 268 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 PIRTP0C851 137 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 PYGMP11217 842 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 TNNT3P45378 269 aaPredicted RBP21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 GNPDA1P46926 289 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 POLD2P49005 469 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 OTUD4Q01804 1114 aaKnown RBP21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 KYQ8NBH2 561 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 ACTL9Q8TC94 416 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 HIC2Q96JB3 615 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 MAGEE1Q9HCI5 957 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 SUFUQ9UMX1 484 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 SHOC2Q9UQ13 582 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 SLC17A4Q9Y2C5 497 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 MYLKQ15746 1914 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 RP1P56715 2156 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 APC2O95996 2303 aa21.78■■□□□ 1.08
PPFIA3-208ENST00000602726 WDFY3Q8IZQ1 3526 aa21.77■■□□□ 1.08
PPFIA3-208ENST00000602726 MIF4GDA9UHW6 222 aaKnown RBP21.77■■□□□ 1.08
PPFIA3-208ENST00000602726 INPP4BO15327 924 aa21.77■■□□□ 1.08
PPFIA3-208ENST00000602726 FUCA1P04066 466 aa21.77■■□□□ 1.08
PPFIA3-208ENST00000602726 PTMAP06454 111 aaKnown RBP21.77■■□□□ 1.08
PPFIA3-208ENST00000602726 IVLP07476 585 aa21.77■■□□□ 1.08
PPFIA3-208ENST00000602726 RBL1P28749 1068 aa21.77■■□□□ 1.08
PPFIA3-208ENST00000602726 WNT3AP56704 352 aa21.77■■□□□ 1.08
PPFIA3-208ENST00000602726 CYP4F3Q08477 520 aa21.77■■□□□ 1.08
PPFIA3-208ENST00000602726 ILF3Q12906 894 aaKnown RBP eCLIP21.77■■□□□ 1.08
PPFIA3-208ENST00000602726 PERM1Q5SV97 790 aa21.77■■□□□ 1.08
PPFIA3-208ENST00000602726 CDCP2Q5VXM1 449 aa21.77■■□□□ 1.08
PPFIA3-208ENST00000602726 AADACL2Q6P093 401 aa21.77■■□□□ 1.08
PPFIA3-208ENST00000602726 CCL4L1Q8NHW4 92 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms