RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ABCG8Q9H221 673 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 SEMA6CQ9H3T2 930 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 LUC7L2Q9Y383 392 aaKnown RBP16.94■□□□□ 0.3
SCAF1-204ENST00000601038 ST14Q9Y5Y6 855 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 COL6A6A6NMZ7 2263 aa16.94■□□□□ 0.3
SCAF1-204ENST00000601038 A0A0J9YYE9 177 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 A0A0U1RQS6 177 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 MATN3O15232 486 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 MFSD11O43934 449 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 SOD1P00441 154 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 TRBC1P01850 177 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 LIPCP11150 499 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 CCNCP24863 283 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 GPR3P46089 330 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 OR1D5P58170 312 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 PTSQ03393 145 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 DPYSL3Q14195 570 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 TGIF1Q15583 401 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 IFI16Q16666 785 aaKnown RBP16.93■□□□□ 0.3
SCAF1-204ENST00000601038 AMZ1Q400G9 498 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 MAP9Q49MG5 647 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 ATP13A4Q4VNC1 1196 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 PHF19Q5T6S3 580 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 NCBP2-AS2Q69YL0 99 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 SLC30A9Q6PML9 568 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 ADAMTSL4Q6UY14 1074 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 RFLNAQ6ZTI6 216 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 NAGSQ8N159 534 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 FATE1Q969F0 183 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 TSGA13Q96PP4 275 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 SEMA4CQ9C0C4 833 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 B3GNT4Q9C0J1 378 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 RDH14Q9HBH5 336 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 HAUS2Q9NVX0 235 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 AKAP7Q9P0M2 348 aaPredicted RBP16.93■□□□□ 0.3
SCAF1-204ENST00000601038 SEPT10Q9P0V9 454 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 AMACRQ9UHK6 382 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 CD84Q9UIB8 345 aa16.93■□□□□ 0.3
SCAF1-204ENST00000601038 PRAMEF33A0A0G2JMD5 474 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 PRAMEF10O60809 474 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 PYGLP06737 847 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 ETV5P41161 510 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 EPHB1P54762 984 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 DSC2Q02487 901 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 BIRC2Q13490 618 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 IHHQ14623 411 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 PDK2Q15119 407 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 ANKRD20A8PQ5CZ79 823 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 USP53Q70EK8 1073 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 ZNF765Q7L2R6 523 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 MAP7D3Q8IWC1 876 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 RAVER1Q8IY67 606 aaKnown RBP16.92■□□□□ 0.3
SCAF1-204ENST00000601038 KCTD6Q8NC69 237 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 ZNF564Q8TBZ8 553 aaPredicted RBP16.92■□□□□ 0.3
SCAF1-204ENST00000601038 USP7Q93009 1102 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 SCAMP4Q969E2 229 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 MED8Q96G25 268 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 SMIM14Q96QK8 99 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 ZNF670Q9BS34 389 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 CDH19Q9H159 772 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 RBM22Q9NW64 420 aaKnown RBP eCLIP16.92■□□□□ 0.3
SCAF1-204ENST00000601038 WDR70Q9NW82 654 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 DNPEPQ9ULA0 475 aa16.92■□□□□ 0.3
SCAF1-204ENST00000601038 SYCE3A1L190 88 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 AGRPO00253 132 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 HGSO14964 777 aaPredicted RBP16.91■□□□□ 0.3
SCAF1-204ENST00000601038 PRLP01236 227 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 CD82P27701 267 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 CD1CP29017 333 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 ACTR1BP42025 376 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 MAPK10P53779 464 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 ACTR1AP61163 376 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 SQSTM1Q13501 440 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 C16orf72Q14CZ0 275 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 PYCR3Q53H96 274 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 DOK6Q6PKX4 331 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 ZNF574Q6ZN55 896 aaPredicted RBP16.91■□□□□ 0.3
SCAF1-204ENST00000601038 NRSN1Q8IZ57 195 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 EXD1Q8NHP7 514 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 ARRDC2Q8TBH0 407 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 PATE1Q8WXA2 126 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 OR2M4Q96R27 311 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 NUDT22Q9BRQ3 303 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 TDRD1Q9BXT4 1180 aaKnown RBP16.91■□□□□ 0.3
SCAF1-204ENST00000601038 FOXJ2Q9P0K8 574 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 UVRAGQ9P2Y5 699 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 NENFQ9UMX5 172 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 CHKBQ9Y259 395 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 TMEM98Q9Y2Y6 226 aa16.91■□□□□ 0.3
SCAF1-204ENST00000601038 B8ZZF3 427 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 C9orf172C9J069 976 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 PPM1DO15297 605 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 PROSCO94903 275 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 MAP3K6O95382 1288 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 GYPCP04921 128 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 CA4P22748 312 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 STC1P52823 247 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 RPL26P61254 145 aaKnown RBP16.9■□□□□ 0.3
SCAF1-204ENST00000601038 TMEM164Q5U3C3 297 aa16.9■□□□□ 0.3
SCAF1-204ENST00000601038 ZFAND4Q86XD8 727 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms