RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 WDR26Q9H7D7 661 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 MAGEE1Q9HCI5 957 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 LZTFL1Q9NQ48 299 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 UCKL1Q9NWZ5 548 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 NFKBIL1Q9UBC1 381 aaPredicted RBP16.15■□□□□ 0.18
LSM4-206ENST00000600289 PNMA8BQ9ULN7 279 aaPredicted RBP16.15■□□□□ 0.18
LSM4-206ENST00000600289 OR1A2Q9Y585 309 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 PCDHGA1Q9Y5H4 931 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 DGKBQ9Y6T7 804 aa16.15■□□□□ 0.18
LSM4-206ENST00000600289 ZFC3H1O60293 1989 aaKnown RBP16.15■□□□□ 0.18
LSM4-206ENST00000600289 PDE2AO00408 941 aaPredicted RBP16.14■□□□□ 0.17
LSM4-206ENST00000600289 TPP1O14773 563 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 LDOC1O95751 146 aaPredicted RBP16.14■□□□□ 0.17
LSM4-206ENST00000600289 SOD1P00441 154 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 ALPPL2P10696 532 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 MYCLP1P12525 358 aaPredicted RBP16.14■□□□□ 0.17
LSM4-206ENST00000600289 PPARDQ03181 441 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 GALNT3Q14435 633 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 ALG11Q2TAA5 492 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 ZNF542PQ5EBM4 170 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 SEL1L2Q5TEA6 688 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 PID1Q7Z2X4 250 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 KLHDC8BQ8IXV7 354 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 PELI3Q8N2H9 469 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 SDR16C5Q8N3Y7 309 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 FAM181AQ8N9Y4 354 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 SLC35B2Q8TB61 432 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 CNDP2Q96KP4 475 aaKnown RBP16.14■□□□□ 0.17
LSM4-206ENST00000600289 PPP1R2P1Q96PQ5 205 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 DUSP23Q9BVJ7 150 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 FRMD8P1Q9BZ68 369 aaPredicted RBP16.14■□□□□ 0.17
LSM4-206ENST00000600289 USP29Q9HBJ7 922 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 SPASTQ9UBP0 616 aa16.14■□□□□ 0.17
LSM4-206ENST00000600289 APOBEC3BQ9UH17 382 aaKnown RBP16.14■□□□□ 0.17
LSM4-206ENST00000600289 C1orf232A0A0U1RR37 186 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 K7ESM1 405 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 ENC1O14682 589 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 AQP9O43315 295 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 STK10O94804 968 aaKnown RBP16.13■□□□□ 0.17
LSM4-206ENST00000600289 RASGRP1O95267 797 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 CLDN7O95471 211 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 PTMAP06454 111 aaKnown RBP16.13■□□□□ 0.17
LSM4-206ENST00000600289 CDK4P11802 303 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 HK3P52790 923 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 ILKQ13418 452 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 RPS6KA1Q15418 735 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 PCSK7Q16549 785 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 FAM182AQ5T1J6 154 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 DENND2CQ68D51 928 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 DARS2Q6PI48 645 aaKnown RBP16.13■□□□□ 0.17
LSM4-206ENST00000600289 ENPP7Q6UWV6 458 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 ADAMTSL4Q6UY14 1074 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 SLCO6A1Q86UG4 719 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 FSTL5Q8N475 847 aaPredicted RBP16.13■□□□□ 0.17
LSM4-206ENST00000600289 OR56A4Q8NGH8 313 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 CCHCR1Q8TD31 782 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 AP2M1Q96CW1 435 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 OXNAD1Q96HP4 312 aaPredicted RBP16.13■□□□□ 0.17
LSM4-206ENST00000600289 MRGPRX2Q96LB1 330 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 LRRC61Q9BV99 259 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 SLC13A1Q9BZW2 595 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 CDH19Q9H159 772 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 ABCG8Q9H221 673 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 PHPT1Q9NRX4 125 aaPredicted RBP16.13■□□□□ 0.17
LSM4-206ENST00000600289 PKD2L2Q9NZM6 624 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 KLQ9UEF7 1012 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 RSPH14Q9UHP6 348 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 MYLKQ15746 1914 aa16.13■□□□□ 0.17
LSM4-206ENST00000600289 C5orf60A6NFR6 353 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 TMEM202A6NGA9 273 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 LMO7DNF2Z398 122 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 TRIM38O00635 465 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 KCNN4O15554 427 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 SIGLEC6O43699 453 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 PMPCBO75439 489 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 ANXA9O76027 345 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 ATXN1LP0C7T5 689 aaKnown RBP16.12■□□□□ 0.17
LSM4-206ENST00000600289 HLA-DPA1P20036 260 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 ACP1P24666 158 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 SPINT3P49223 89 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 ACADVLP49748 655 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 WNT3AP56704 352 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 DCDC1P59894 354 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 SRP54P61011 504 aaKnown RBP16.12■□□□□ 0.17
LSM4-206ENST00000600289 CDK3Q00526 305 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 HS1BP3Q53T59 392 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 ANKRD20A2Q5SQ80 823 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 HENMT1Q5T8I9 393 aaKnown RBP16.12■□□□□ 0.17
LSM4-206ENST00000600289 ANKRD20A1Q5TYW2 823 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 ANKRD20A3Q5VUR7 823 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 CCDC70Q6NSX1 233 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 ZCCHC8Q6NZY4 707 aaKnown RBP16.12■□□□□ 0.17
LSM4-206ENST00000600289 CCNI2Q6ZMN8 369 aaPredicted RBP16.12■□□□□ 0.17
LSM4-206ENST00000600289 TMC3Q7Z5M5 1100 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 HEATR4Q86WZ0 1026 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 RBFAQ8N0V3 343 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 SPATA13Q96N96 652 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 UBL7Q96S82 380 aaPredicted RBP16.12■□□□□ 0.17
LSM4-206ENST00000600289 GORASP1Q9BQQ3 440 aa16.12■□□□□ 0.17
LSM4-206ENST00000600289 FRMD8Q9BZ67 464 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms