RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 APOC2P02655 101 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 NFKB1P19838 968 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 RBL1P28749 1068 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 CETN2P41208 172 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 DRG2P55039 364 aaKnown RBP12.08□□□□□ -0.48
ZNF548-209ENST00000598895 PFN3P60673 137 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 COPS2P61201 443 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 PPP2R2AP63151 447 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 WASHC5Q12768 1159 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 FOXC1Q12948 553 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 ARHGEF7Q14155 803 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 INPP5AQ14642 412 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 NOMO1Q15155 1222 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 TCEA2Q15560 299 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 USP45Q70EL2 814 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 HSD11B1LQ7Z5J1 315 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 CNPY4Q8N129 248 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 PELI3Q8N2H9 469 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 OXR1Q8N573 874 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 PNPLA1Q8N8W4 532 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 ACTL9Q8TC94 416 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 SAP25Q8TEE9 199 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 UBLCP1Q8WVY7 318 aaPredicted RBP12.08□□□□□ -0.48
ZNF548-209ENST00000598895 HTR3CQ8WXA8 447 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 SCRN2Q96FV2 425 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 QKIQ96PU8 341 aaKnown RBP eCLIP12.08□□□□□ -0.486e-7■■■■□ 19.5
ZNF548-209ENST00000598895 ERVMER34-1Q9H9K5 563 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 GLOD4Q9HC38 313 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 UCKL1Q9NWZ5 548 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 KLHL8Q9P2G9 620 aaPredicted RBP12.08□□□□□ -0.48
ZNF548-209ENST00000598895 CD84Q9UIB8 345 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 PCDHGB2Q9Y5G2 931 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 TDRD6O60522 2096 aaKnown RBP12.07□□□□□ -0.48
ZNF548-209ENST00000598895 DCHS1Q96JQ0 3298 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 A0A0J9YYE9 177 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 SPTY2D1-AS1A0A0U1RR47 76 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 GMNCA6NCL1 334 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 H0YHG0 523 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 CBFA2T3O75081 653 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 PMPCBO75439 489 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 TOP3BO95985 862 aaKnown RBP12.07□□□□□ -0.48
ZNF548-209ENST00000598895 PRLP01236 227 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 TRBC1P01850 177 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 SLC4A1P02730 911 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 ADRB1P08588 477 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 PIRTP0C851 137 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 CA4P22748 312 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 CES1P23141 567 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 ECHS1P30084 290 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 ETV3P41162 512 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 GRK6P43250 576 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 GTF2A1P52655 376 aaPredicted RBP12.07□□□□□ -0.48
ZNF548-209ENST00000598895 EIF3EP60228 445 aaKnown RBP12.07□□□□□ -0.48
ZNF548-209ENST00000598895 GUCY1A3Q02108 690 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 ZNF844Q08AG5 666 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 IFFO1Q0D2I5 559 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 TEX44Q53QW1 395 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 LRRC66Q68CR7 880 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 CRTC1Q6UUV9 634 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 DBX2Q6ZNG2 339 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 RFLNAQ6ZTI6 216 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 Q6ZVL8 140 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 PID1Q7Z2X4 250 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 RD3Q7Z3Z2 195 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 PARGQ86W56 976 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 RBFAQ8N0V3 343 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 NDUFAF2Q8N183 169 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 ZNF567Q8N184 647 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 NUS1Q96E22 293 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 IMP4Q96G21 291 aaKnown RBP12.07□□□□□ -0.48
ZNF548-209ENST00000598895 TEKT5Q96M29 485 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 COQ10AQ96MF6 247 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 CCT8L2Q96SF2 557 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 APOOQ9BUR5 198 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 STMN4Q9H169 189 aaPredicted RBP12.07□□□□□ -0.48
ZNF548-209ENST00000598895 TCEAL2Q9H3H9 227 aaPredicted RBP12.07□□□□□ -0.48
ZNF548-209ENST00000598895 GPR27Q9NS67 375 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 PNMA8BQ9ULN7 279 aaPredicted RBP12.07□□□□□ -0.48
ZNF548-209ENST00000598895 NFS1Q9Y697 457 aa12.07□□□□□ -0.48
ZNF548-209ENST00000598895 DNAH14Q0VDD8 3507 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 TCRBV7S2A1N4TA0A589 114 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 CFAP69A5D8W1 941 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 CAPN8A6NHC0 703 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 E7EVH7 732 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 K7ESM1 405 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 YKT6O15498 198 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 PPFIA2O75334 1257 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 TJP3O95049 919 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 CLDN7O95471 211 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 C1SP09871 688 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 ATXN1LP0C7T5 689 aaKnown RBP12.06□□□□□ -0.48
ZNF548-209ENST00000598895 RBP3P10745 1247 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 SPINK2P20155 84 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 DGKAP23743 735 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 NFKBIAP25963 317 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 CD68P34810 354 aaPredicted RBP12.06□□□□□ -0.48
ZNF548-209ENST00000598895 PTPN7P35236 360 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 RXRGP48443 463 aa12.06□□□□□ -0.48
ZNF548-209ENST00000598895 EIF2B5Q13144 721 aaKnown RBP12.06□□□□□ -0.48
ZNF548-209ENST00000598895 C1orf61Q13536 156 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms