RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 RP1P56715 2156 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 AGRPO00253 132 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 TNFRSF10CO14798 259 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 NOBOXO60393 691 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 CLDN7O95471 211 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 SOD1P00441 154 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 COMTP21964 271 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 KELP23276 732 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 NFKBIAP25963 317 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 NOP2P46087 812 aaKnown RBP13.72□□□□□ -0.21
SCAF1-203ENST00000598359 GNPDA1P46926 289 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 CCL7P80098 99 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 SKOR1P84550 965 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 CDK3Q00526 305 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 AP1B1Q10567 949 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 TBC1D25Q3MII6 688 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 DNTTIP2Q5QJE6 756 aaKnown RBP13.72□□□□□ -0.21
SCAF1-203ENST00000598359 SLC9A4Q6AI14 798 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 MFSD7Q6UXD7 560 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 KDELC2Q7Z4H8 507 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 B3GNT8Q7Z7M8 397 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 NRROSQ86YC3 692 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 GPR156Q8NFN8 814 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 FGF11Q92914 225 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 FATE1Q969F0 183 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 FRMD8Q9BZ67 464 aaPredicted RBP13.72□□□□□ -0.21
SCAF1-203ENST00000598359 BRD8Q9H0E9 1235 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 DPEP2Q9H4A9 486 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 PCDH9Q9HC56 1237 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 SPATS2LQ9NUQ6 558 aaKnown RBP13.72□□□□□ -0.21
SCAF1-203ENST00000598359 SUFUQ9UMX1 484 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 SATB2Q9UPW6 733 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 TMEM98Q9Y2Y6 226 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 PLEKHM1Q9Y4G2 1056 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 ST14Q9Y5Y6 855 aa13.72□□□□□ -0.21
SCAF1-203ENST00000598359 CAPN8A6NHC0 703 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 PSMD11O00231 422 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 APOL1O14791 398 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 INPP4BO15327 924 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 SPOPO43791 374 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 RPLP0P05388 317 aaKnown RBP13.71□□□□□ -0.21
SCAF1-203ENST00000598359 KRT10P13645 584 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 AK4P27144 223 aaPredicted RBP13.71□□□□□ -0.21
SCAF1-203ENST00000598359 ACTN2P35609 894 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 MAGEA1P43355 309 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 ABCG1P45844 678 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 GPR1P46091 355 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 STC1P52823 247 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 IFI35P80217 286 aaPredicted RBP13.71□□□□□ -0.21
SCAF1-203ENST00000598359 PPIDQ08752 370 aaKnown RBP13.71□□□□□ -0.21
SCAF1-203ENST00000598359 SPIDRQ14159 915 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 GALNT3Q14435 633 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 QPCTQ16769 361 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 MARK2Q7KZI7 788 aaKnown RBP13.71□□□□□ -0.21
SCAF1-203ENST00000598359 RHOT1Q8IXI2 618 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 SNIP1Q8TAD8 396 aaKnown RBP13.71□□□□□ -0.21
SCAF1-203ENST00000598359 AP2M1Q96CW1 435 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 AGAP3Q96P47 875 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 RIOK2Q9BVS4 552 aaKnown RBP13.71□□□□□ -0.21
SCAF1-203ENST00000598359 MAK16Q9BXY0 300 aaKnown RBP13.71□□□□□ -0.21
SCAF1-203ENST00000598359 FOXP3Q9BZS1 431 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 POLR1BQ9H9Y6 1135 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 SAE1Q9UBE0 346 aaPredicted RBP13.71□□□□□ -0.21
SCAF1-203ENST00000598359 AMACRQ9UHK6 382 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 RNF215Q9Y6U7 377 aa13.71□□□□□ -0.21
SCAF1-203ENST00000598359 A0A1W2PQM1 296 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 GOLGA6L9A6NEM1 432 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 CYSRT1A8MQ03 144 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 PDE2AO00408 941 aaPredicted RBP13.7□□□□□ -0.22
SCAF1-203ENST00000598359 NTN3O00634 580 aaPredicted RBP13.7□□□□□ -0.22
SCAF1-203ENST00000598359 PRB1P04280 392 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 PIRTP0C851 137 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 CES1P23141 567 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 LSSP48449 732 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 MARCKSL1P49006 195 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 MAZP56270 477 aaKnown RBP13.7□□□□□ -0.22
SCAF1-203ENST00000598359 ADCY2Q08462 1091 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 ODF2Q5BJF6 829 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 LRRC38Q5VT99 294 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 KAZNQ674X7 775 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 OGFOD3Q6PK18 319 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 SLC30A9Q6PML9 568 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 LRRC69Q6ZNQ3 347 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 NDUFAF2Q8N183 169 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 PATE1Q8WXA2 126 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 PRR11Q96HE9 360 aaPredicted RBP13.7□□□□□ -0.22
SCAF1-203ENST00000598359 C16orf45Q96MC5 204 aaPredicted RBP13.7□□□□□ -0.22
SCAF1-203ENST00000598359 OLFM3Q96PB7 478 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 ASCL3Q9NQ33 180 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 INTUQ9ULD6 942 aa13.7□□□□□ -0.22
SCAF1-203ENST00000598359 ATXN7L1Q9ULK2 861 aaPredicted RBP13.7□□□□□ -0.22
SCAF1-203ENST00000598359 C1orf232A0A0U1RR37 186 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 ZNF487B1APH4 448 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 RRP8O43159 456 aaKnown RBP13.69□□□□□ -0.22
SCAF1-203ENST00000598359 ZSCAN12O43309 604 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 TCEA3O75764 348 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 FGF1P05230 155 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 PECAM1P16284 738 aaPredicted RBP13.69□□□□□ -0.22
SCAF1-203ENST00000598359 CA4P22748 312 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 ADCY8P40145 1251 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms