RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 KCTD16Q68DU8 428 aa13.81□□□□□ -0.2
UPF1-205ENST00000598209 NLRP8Q86W28 1048 aa13.81□□□□□ -0.2
UPF1-205ENST00000598209 SLC25A41Q8N5S1 370 aa13.81□□□□□ -0.2
UPF1-205ENST00000598209 OR56A4Q8NGH8 313 aa13.81□□□□□ -0.2
UPF1-205ENST00000598209 ATG4AQ8WYN0 398 aa13.81□□□□□ -0.2
UPF1-205ENST00000598209 OR1E3Q8WZA6 343 aa13.81□□□□□ -0.2
UPF1-205ENST00000598209 PDXPQ96GD0 296 aa13.81□□□□□ -0.2
UPF1-205ENST00000598209 PDLIM2Q96JY6 352 aa13.81□□□□□ -0.2
UPF1-205ENST00000598209 SRPK1Q96SB4 655 aaKnown RBP13.81□□□□□ -0.2
UPF1-205ENST00000598209 DUSP23Q9BVJ7 150 aa13.81□□□□□ -0.2
UPF1-205ENST00000598209 RIOK2Q9BVS4 552 aaKnown RBP13.81□□□□□ -0.2
UPF1-205ENST00000598209 FSD1LQ9BXM9 530 aa13.81□□□□□ -0.2
UPF1-205ENST00000598209 TLR10Q9BXR5 811 aa13.81□□□□□ -0.2
UPF1-205ENST00000598209 GPR63Q9BZJ6 419 aa13.81□□□□□ -0.2
UPF1-205ENST00000598209 FGF22Q9HCT0 170 aa13.81□□□□□ -0.2
UPF1-205ENST00000598209 MRPL40Q9NQ50 206 aaKnown RBP13.81□□□□□ -0.2
UPF1-205ENST00000598209 ARHGEF17Q96PE2 2063 aaPredicted RBP13.81□□□□□ -0.2
UPF1-205ENST00000598209 RGSL1A5PLK6 1076 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 C5orf60A6NFR6 353 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 TNFRSF10CO14798 259 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 HYAL3O43820 417 aaPredicted RBP13.8□□□□□ -0.2
UPF1-205ENST00000598209 DKK1O94907 266 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 PYGLP06737 847 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 CTSEP14091 401 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 HLA-DPA1P20036 260 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 CHRNA4P43681 627 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 ACADVLP49748 655 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 PRPSAP1Q14558 356 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 TCEA2Q15560 299 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 SLC1A5Q15758 541 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 DEFB133Q30KQ1 61 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 SIRPB2Q5JXA9 342 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 ADAMTSL4Q6UY14 1074 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 TMC3Q7Z5M5 1100 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 RAB44Q7Z6P3 723 aaPredicted RBP13.8□□□□□ -0.2
UPF1-205ENST00000598209 FSTL5Q8N475 847 aaPredicted RBP13.8□□□□□ -0.2
UPF1-205ENST00000598209 CHCHD4Q8N4Q1 142 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 FAM71DQ8N9W8 422 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 ADAMTS14Q8WXS8 1223 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 EID2BQ96D98 161 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 WDR24Q96S15 920 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 AGAP2Q99490 1192 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 TMEM121Q9BTD3 319 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 FICDQ9BVA6 458 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 CLPBQ9H078 707 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 FAM83DQ9H4H8 585 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 MOSPD1Q9UJG1 213 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 ANGPTL2Q9UKU9 493 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 WASF3Q9UPY6 502 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 SPO11Q9Y5K1 396 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 DGKBQ9Y6T7 804 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 PLXNB3Q9ULL4 1909 aa13.8□□□□□ -0.2
UPF1-205ENST00000598209 PRSS38A1L453 326 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 LMO7DNF2Z398 122 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 TPP1O14773 563 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 AURKAO14965 403 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 FGF1P05230 155 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 ANXA6P08133 673 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 CELA2BP08218 269 aaPredicted RBP13.79□□□□□ -0.2
UPF1-205ENST00000598209 CKMT2P17540 419 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 SPINK2P20155 84 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 SHC2P98077 582 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 DAB2P98082 770 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 ELOCQ15369 112 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 HENMT1Q5T8I9 393 aaKnown RBP13.79□□□□□ -0.2
UPF1-205ENST00000598209 ZCCHC8Q6NZY4 707 aaKnown RBP13.79□□□□□ -0.2
UPF1-205ENST00000598209 ARHGEF18Q6ZSZ5 1173 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 REXO1L1PQ8IX06 675 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 FAM181AQ8N9Y4 354 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 APOLD1Q96LR9 279 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 FRMD8Q9BZ67 464 aaPredicted RBP13.79□□□□□ -0.2
UPF1-205ENST00000598209 FRMD8P1Q9BZ68 369 aaPredicted RBP13.79□□□□□ -0.2
UPF1-205ENST00000598209 CYP4F12Q9HCS2 524 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 DOLKQ9UPQ8 538 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 AAR2Q9Y312 384 aaKnown RBP13.79□□□□□ -0.2
UPF1-205ENST00000598209 PCDHGA1Q9Y5H4 931 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 MYLKQ15746 1914 aa13.79□□□□□ -0.2
UPF1-205ENST00000598209 ZNF106Q9H2Y7 1883 aaKnown RBP13.78□□□□□ -0.2
UPF1-205ENST00000598209 INPP4BO15327 924 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 YY2O15391 372 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 ZSCAN12O43309 604 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 LIASO43766 372 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 RFPL3O75679 317 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 AGTP01019 485 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 CEACAM5P06731 702 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 MYF5P13349 255 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 ACP1P24666 158 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 ADRA1AP35348 466 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 GDF10P55107 478 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 OASLQ15646 514 aaKnown RBP13.78□□□□□ -0.2
UPF1-205ENST00000598209 ALS2CLQ60I27 953 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 DOK6Q6PKX4 331 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 TRIM74Q86UV6 250 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 GKN2Q86XP6 184 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 GPR26Q8NDV2 337 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 C1orf54Q8WWF1 131 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 HIC2Q96JB3 615 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 PPP1R2P1Q96PQ5 205 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 SCNM1Q9BWG6 230 aa13.78□□□□□ -0.2
UPF1-205ENST00000598209 TRABDQ9H4I3 376 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms