RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 THOP1P52888 689 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 ARL4CP56559 192 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 CDK16Q00536 496 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 SPEM2Q0P670 501 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 PDIA2Q13087 525 aaKnown RBP9.27□□□□□ -0.93
ZNF548-206ENST00000597047 MORF4L2Q15014 288 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 TEAD4Q15561 434 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 CHRNA6Q15825 494 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 HIF1AQ16665 826 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 CDKN3Q16667 212 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 SKIDA1Q1XH10 827 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 ZNF542PQ5EBM4 170 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 DNAJC21Q5F1R6 531 aaKnown RBP9.27□□□□□ -0.93
ZNF548-206ENST00000597047 PCID2Q5JVF3 399 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 ZNF648Q5T619 568 aaPredicted RBP9.27□□□□□ -0.93
ZNF548-206ENST00000597047 DUPD1Q68J44 220 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 LAIR1Q6GTX8 287 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 HIBCHQ6NVY1 386 aaPredicted RBP9.27□□□□□ -0.93
ZNF548-206ENST00000597047 PNCKQ6P2M8 343 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 ENPP7Q6UWV6 458 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 ZNF534Q76KX8 674 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 MARK2Q7KZI7 788 aaKnown RBP9.27□□□□□ -0.93
ZNF548-206ENST00000597047 TECPR1Q7Z6L1 1165 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 TRIM74Q86UV6 250 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 CAND1Q86VP6 1230 aaKnown RBP9.27□□□□□ -0.93
ZNF548-206ENST00000597047 SYT12Q8IV01 421 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 PDIK1LQ8N165 341 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 PELI3Q8N2H9 469 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 DCLK2Q8N568 766 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 TP53I13Q8NBR0 393 aaPredicted RBP9.27□□□□□ -0.93
ZNF548-206ENST00000597047 MCUQ8NE86 351 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 OR13H1Q8NG92 308 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 ZNF778Q96MU6 729 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 LYSMD1Q96S90 227 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 TRIM56Q9BRZ2 755 aaKnown RBP9.27□□□□□ -0.93
ZNF548-206ENST00000597047 PCED1AQ9H1Q7 454 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 ARNT2Q9HBZ2 717 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 XAB2Q9HCS7 855 aaKnown RBP9.27□□□□□ -0.93
ZNF548-206ENST00000597047 SAYSD1Q9NPB0 183 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 FAM114A2Q9NRY5 505 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 WHRNQ9P202 907 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 SLC2A6Q9UGQ3 507 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 CHMP2BQ9UQN3 213 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 DMTF1Q9Y222 760 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 TCAF1Q9Y4C2 921 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 SLC30A1Q9Y6M5 507 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 GON4LQ3T8J9 2241 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 SPAG17Q6Q759 2223 aa9.27□□□□□ -0.93
ZNF548-206ENST00000597047 GLYATL1P3A0A0U1RQE8 302 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 A6NNZ2 444 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 GOLGA8KD6RF30 607 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 GOLGA8TH3BQL2 631 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 PSMD11O00231 422 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 CACNB4O00305 520 aaPredicted RBP9.26□□□□□ -0.93
ZNF548-206ENST00000597047 NDC80O14777 642 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 LATO43561 262 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 LDB2O43679 373 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 MTX2O75431 263 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 EPN2O95208 641 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 WNT1P04628 370 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 PRSS56P0CW18 603 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 C7P10643 843 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 GM2AP17900 193 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 MC4RP32245 332 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 HMGCLP35914 325 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 MPLP40238 635 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 ELK3P41970 407 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 AFF3P51826 1226 aaKnown RBP9.26□□□□□ -0.93
ZNF548-206ENST00000597047 ATXN3P54252 364 aaPredicted RBP9.26□□□□□ -0.93
ZNF548-206ENST00000597047 RACK1P63244 317 aaKnown RBP9.26□□□□□ -0.93
ZNF548-206ENST00000597047 PRAMEP78395 509 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 PDE1BQ01064 536 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 LAMB3Q13751 1172 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 PDE1CQ14123 709 aaPredicted RBP9.26□□□□□ -0.93
ZNF548-206ENST00000597047 DUOXA1Q1HG43 343 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 MSS51Q4VC12 460 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 GLE1Q53GS7 698 aaKnown RBP9.26□□□□□ -0.93
ZNF548-206ENST00000597047 TRIM61Q5EBN2 209 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 SPDYCQ5MJ68 293 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 TSTD2Q5T7W7 516 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 TCEAL6Q6IPX3 200 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 ESRP1Q6NXG1 681 aaKnown RBP9.26□□□□□ -0.93
ZNF548-206ENST00000597047 GCNT7Q6ZNI0 430 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 HOOK3Q86VS8 718 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 HEATR4Q86WZ0 1026 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 KLHDC8BQ8IXV7 354 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 IFT20Q8IY31 132 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 NRSN1Q8IZ57 195 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 STYXQ8WUJ0 223 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 TCEAL3Q969E4 200 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 HDAC10Q969S8 669 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 SKA1Q96BD8 255 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 ZNF669Q96BR6 464 aaPredicted RBP9.26□□□□□ -0.93
ZNF548-206ENST00000597047 CENPTQ96BT3 561 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 STAMBPL1Q96FJ0 436 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 BMFQ96LC9 184 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 TBATAQ96M53 351 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 APOOQ9BUR5 198 aa9.26□□□□□ -0.93
ZNF548-206ENST00000597047 NUSAP1Q9BXS6 441 aaKnown RBP9.26□□□□□ -0.93
ZNF548-206ENST00000597047 IL22Q9GZX6 179 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms