RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 MUC3BQ9H195 1237 aa22.64■■□□□ 1.21
SRRM1-222ENST00000596378 VCXQ9H320 206 aa22.64■■□□□ 1.21
SRRM1-222ENST00000596378 MID1IP1Q9NPA3 183 aa22.64■■□□□ 1.21
SRRM1-222ENST00000596378 PSMD13Q9UNM6 376 aa22.64■■□□□ 1.21
SRRM1-222ENST00000596378 DNAJC15Q9Y5T4 150 aa22.64■■□□□ 1.21
SRRM1-222ENST00000596378 A0A1B0GTL3 188 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 HOXA2O43364 376 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 SRP72O76094 671 aaKnown RBP22.63■■□□□ 1.21
SRRM1-222ENST00000596378 LYNP07948 512 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 ALDOCP09972 364 aaKnown RBP22.63■■□□□ 1.21
SRRM1-222ENST00000596378 GFAPP14136 432 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 TUFMP49411 452 aaKnown RBP22.63■■□□□ 1.21
SRRM1-222ENST00000596378 PSME3P61289 254 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 MTA1Q13330 715 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 RFTN1Q14699 578 aaPredicted RBP22.63■■□□□ 1.21
SRRM1-222ENST00000596378 GEN1Q17RS7 908 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 LAYNQ6UX15 382 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 PQLC1Q8N2U9 271 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 TUBGCP5Q96RT8 1024 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 CLSTN3Q9BQT9 956 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 CACNA2D2Q9NY47 1150 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 RAI2Q9Y5P3 530 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 GBF1Q92538 1859 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 ANKRD12Q6UB98 2062 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 E7ENX8 843 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 NME5P56597 212 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 ARF5P84085 180 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 GSTA3Q16772 222 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 PSAPL1Q6NUJ1 521 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 PAOXQ6QHF9 649 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 PIANPQ8IYJ0 282 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 KLHL32Q96NJ5 620 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 SLC30A3Q99726 388 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 FKBPLQ9UIM3 349 aa22.63■■□□□ 1.21
SRRM1-222ENST00000596378 ILVBLA1L0T0 632 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 CASQ2O14958 399 aaPredicted RBP22.62■■□□□ 1.21
SRRM1-222ENST00000596378 OR1I1O60431 355 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 ALDH1A3P47895 512 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 TAF1AQ15573 450 aaPredicted RBP22.62■■□□□ 1.21
SRRM1-222ENST00000596378 RNF220Q5VTB9 566 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 CXorf57Q6NSI4 855 aaKnown RBP22.62■■□□□ 1.21
SRRM1-222ENST00000596378 KIAA1841Q6NSI8 718 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 AFTPHQ6ULP2 937 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 PDZD8Q8NEN9 1154 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 TRPC4APQ8TEL6 797 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 PLD4Q96BZ4 506 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 GPR21Q99679 349 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 YIPF3Q9GZM5 350 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 INTS10Q9NVR2 710 aaKnown RBP22.62■■□□□ 1.21
SRRM1-222ENST00000596378 ZDHHC7Q9NXF8 308 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 RIMKLBQ9ULI2 386 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 CAPN8A6NHC0 703 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 SUPT3HB4E1H0 165 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 ACOT8O14734 319 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 GPR39O43194 453 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 SUPT3HO75486 399 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 CD160O95971 181 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 PENKP01210 267 aaPredicted RBP22.62■■□□□ 1.21
SRRM1-222ENST00000596378 F11P03951 625 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 RALGDSQ12967 914 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 LRP8Q14114 963 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 TTC16Q8NEE8 873 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 NR1H4Q96RI1 486 aaPredicted RBP22.62■■□□□ 1.21
SRRM1-222ENST00000596378 VCX3BQ9H321 246 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 AKTIPQ9H8T0 292 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 COPS7BQ9H9Q2 264 aaPredicted RBP22.62■■□□□ 1.21
SRRM1-222ENST00000596378 POPDC3Q9HBV1 291 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 TRPM5Q9NZQ8 1165 aa22.62■■□□□ 1.21
SRRM1-222ENST00000596378 A0A1B0GVM2 712 aa22.61■■□□□ 1.21
SRRM1-222ENST00000596378 CDC7O00311 574 aa22.61■■□□□ 1.21
SRRM1-222ENST00000596378 PITPNM1O00562 1244 aa22.61■■□□□ 1.21
SRRM1-222ENST00000596378 NDUFS3O75489 264 aa22.61■■□□□ 1.21
SRRM1-222ENST00000596378 ATN1P54259 1190 aaPredicted RBP22.61■■□□□ 1.21
SRRM1-222ENST00000596378 TSNQ15631 228 aaKnown RBP22.61■■□□□ 1.21
SRRM1-222ENST00000596378 PTPRNQ16849 979 aa22.61■■□□□ 1.21
SRRM1-222ENST00000596378 ADGRF1Q5T601 910 aa22.61■■□□□ 1.21
SRRM1-222ENST00000596378 CLYBLQ8N0X4 340 aa22.61■■□□□ 1.21
SRRM1-222ENST00000596378 PCDHAC1Q9H158 963 aa22.61■■□□□ 1.21
SRRM1-222ENST00000596378 TFB2MQ9H5Q4 396 aaKnown RBP22.61■■□□□ 1.21
SRRM1-222ENST00000596378 RNF112Q9ULX5 631 aa22.61■■□□□ 1.21
SRRM1-222ENST00000596378 NCF1BA6NI72 391 aaPredicted RBP22.6■■□□□ 1.21
SRRM1-222ENST00000596378 C2orf81A6NN90 581 aa22.6■■□□□ 1.21
SRRM1-222ENST00000596378 NCF1CA8MVU1 366 aaPredicted RBP22.6■■□□□ 1.21
SRRM1-222ENST00000596378 PIP5K1BO14986 540 aa22.6■■□□□ 1.21
SRRM1-222ENST00000596378 CLASP2O75122 1294 aaKnown RBP22.6■■□□□ 1.21
SRRM1-222ENST00000596378 BCAS2O75934 225 aaPredicted RBP22.6■■□□□ 1.21
SRRM1-222ENST00000596378 EFEMP2O95967 443 aa22.6■■□□□ 1.21
SRRM1-222ENST00000596378 NCF1P14598 390 aaPredicted RBP22.6■■□□□ 1.21
SRRM1-222ENST00000596378 HOXB8P17481 243 aaPredicted RBP22.6■■□□□ 1.21
SRRM1-222ENST00000596378 EEF1DP29692 281 aaKnown RBP22.6■■□□□ 1.21
SRRM1-222ENST00000596378 TRAF2Q12933 501 aa22.6■■□□□ 1.21
SRRM1-222ENST00000596378 OGFRL1Q5TC84 451 aaPredicted RBP22.6■■□□□ 1.21
SRRM1-222ENST00000596378 RAB44Q7Z6P3 723 aaPredicted RBP22.6■■□□□ 1.21
SRRM1-222ENST00000596378 LILRA2Q8N149 483 aa22.6■■□□□ 1.21
SRRM1-222ENST00000596378 RHEBL1Q8TAI7 183 aa22.6■■□□□ 1.21
SRRM1-222ENST00000596378 BHMTQ93088 406 aa22.6■■□□□ 1.21
SRRM1-222ENST00000596378 SLC39A3Q9BRY0 314 aa22.6■■□□□ 1.21
SRRM1-222ENST00000596378 CCDC68Q9H2F9 335 aa22.6■■□□□ 1.21
SRRM1-222ENST00000596378 TAS2R13Q9NYV9 303 aa22.6■■□□□ 1.21
SRRM1-222ENST00000596378 NPEPPSL1A6NEC2 478 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms