RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CCR3P51677 355 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 MAP7D1Q3KQU3 841 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 ZNF789Q5FWF6 425 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 TSTD2Q5T7W7 516 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 NAPRTQ6XQN6 538 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 PTAR1Q7Z6K3 402 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 AMIGO2Q86SJ2 522 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 OR13J1Q8NGT2 312 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 WBP2Q969T9 261 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 SCYL1Q96KG9 808 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 TSNARE1Q96NA8 513 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 SORT1Q99523 831 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 PNPOQ9NVS9 261 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 BCAP29Q9UHQ4 241 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 FBXO5Q9UKT4 447 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 KCTD3Q9Y597 815 aa17.07■□□□□ 0.32
SHKBP1-205ENST00000594973 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 H0YJX3 145 aa17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 SORBS2O94875 1100 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 PIRTP0C851 137 aa17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 HMOX2P30519 316 aa17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 BCAP31P51572 246 aa17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 ABCE1P61221 599 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 TWF1Q12792 350 aa17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 GALNT3Q14435 633 aa17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 CNSTQ6PJW8 725 aa17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 RNF135Q8IUD6 432 aa17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 ZNF784Q8NCA9 323 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 C2CD4AQ8NCU7 369 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 OR6P1Q8NGX9 317 aa17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 BLOC1S5Q8TDH9 187 aa17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 EXOC2Q96KP1 924 aa17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 RANBP9Q96S59 729 aa17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 PDFQ9HBH1 243 aa17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 SELENONQ9NZV5 590 aa17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 RUVBL2Q9Y230 463 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-205ENST00000594973 SIN3BO75182 1162 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 BAIAP3O94812 1187 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 C8BP07358 591 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 ATXN1LP0C7T5 689 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 STMN1P16949 149 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 ITGB8P26012 769 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 HOXD9P28356 352 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 CA8P35219 290 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 RAB10P61026 200 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 SLC12A1Q13621 1099 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 ZNF829Q3KNS6 432 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 TCHHL1Q5QJ38 904 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 C16orf59Q7L2K0 433 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 LDB1Q86U70 411 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 SLC39A11Q8N1S5 342 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 OVCA2Q8WZ82 227 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 CYP2S1Q96SQ9 504 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 C1QTNF1Q9BXJ1 281 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 ACE2Q9BYF1 805 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 TRPC7Q9HCX4 862 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 STK39Q9UEW8 545 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 RIMS3Q9UJD0 308 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 AGO1Q9UL18 857 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 ACOT9Q9Y305 439 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 OR51F1A6NGY5 319 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 H3BNC9 293 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 CSF2RAP15509 400 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 ARSDP51689 593 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 CDH4P55283 916 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 GK3PQ14409 553 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 VEPH1Q14D04 833 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 PAOXQ6QHF9 649 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 DCDC5Q6ZRR9 648 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 CENPLQ8N0S6 344 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 AGR3Q8TD06 166 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 CEP295NLQ96MC4 621 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 MAGEH1Q9H213 219 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 CDH7Q9ULB5 785 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 ARHGAP26Q9UNA1 814 aa17.05■□□□□ 0.32
SHKBP1-205ENST00000594973 LOC285095A0A1B0GVY8 99 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 CLTBP09497 229 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 OCM2P0CE71 109 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 OCMP0CE72 109 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 PSMC3P17980 439 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 TMED10P49755 219 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 CSRP3P50461 194 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 TAS2R39P59534 338 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 TNK2Q07912 1038 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 PTPRCAPQ14761 206 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 C5orf22Q49AR2 442 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 RBM20Q5T481 1227 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 TPGS2Q68CL5 300 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 HDAC10Q969S8 669 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 TADA1Q96BN2 335 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 PLD4Q96BZ4 506 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 MYRFLQ96LU7 910 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 PRPF19Q9UMS4 504 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 ANKRD6Q9Y2G4 727 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 ARL5AQ9Y689 179 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 MIA3Q5JRA6 1907 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 CBX4O00257 560 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 ADAM23O75077 832 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 HSPA4LO95757 839 aa17.04■□□□□ 0.32
SHKBP1-205ENST00000594973 URODP06132 367 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms