RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 PTPN3P26045 913 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 STC1P52823 247 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 ILF3Q12906 894 aaKnown RBP eCLIP17.3■□□□□ 0.36
IRF3-208ENST00000594387 XRCC4Q13426 336 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 BIRC2Q13490 618 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 GALNT3Q14435 633 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 PRKD1Q15139 912 aaPredicted RBP17.3■□□□□ 0.36
IRF3-208ENST00000594387 PTPRRQ15256 657 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 QPCTQ16769 361 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 BBS12Q6ZW61 710 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 MARCH9Q86YJ5 346 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 HTR3CQ8WXA8 447 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 KRT35Q92764 455 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 HAUS1Q96CS2 278 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 HIC2Q96JB3 615 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 GPR63Q9BZJ6 419 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 NRSN2Q9GZP1 204 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 DPEP2Q9H4A9 486 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 FAM83DQ9H4H8 585 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 ZFYVE1Q9HBF4 777 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 TRHDEQ9UKU6 1024 aa17.3■□□□□ 0.36
IRF3-208ENST00000594387 GOLGA6L9A6NEM1 432 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 ZW10O43264 779 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 PMPCBO75439 489 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 ZNF189O75820 626 aaPredicted RBP17.29■□□□□ 0.36
IRF3-208ENST00000594387 GNPDA1P46926 289 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 MARCKSL1P49006 195 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 CYP4F3Q08477 520 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 GUSBP11Q6P575 273 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 DOK6Q6PKX4 331 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 ADAMTSL4Q6UY14 1074 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 SLC35F3Q8IY50 421 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 MDM1Q8TC05 714 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 RIOK2Q9BVS4 552 aaKnown RBP17.29■□□□□ 0.36
IRF3-208ENST00000594387 OSBPL8Q9BZF1 889 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 LACRTQ9GZZ8 138 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 TMEM168Q9H0V1 697 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 CDH19Q9H159 772 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 SYNDIG1Q9H7V2 258 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 MAGEE1Q9HCI5 957 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 TRNAU1APQ9NX07 287 aaKnown RBP17.29■□□□□ 0.36
IRF3-208ENST00000594387 FAM153AQ9UHL3 310 aa17.29■□□□□ 0.36
IRF3-208ENST00000594387 REXO2Q9Y3B8 237 aaKnown RBP17.29■□□□□ 0.36
IRF3-208ENST00000594387 UNC13CQ8NB66 2214 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 CHD8Q9HCK8 2581 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 LY6G6EA0A0G2JKS1 128 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 A0A0U1RQS6 177 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 MIF4GDA9UHW6 222 aaKnown RBP17.28■□□□□ 0.36
IRF3-208ENST00000594387 NRDCO43847 1150 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 NDST3O95803 873 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 MT-CYBP00156 380 aaPredicted RBP17.28■□□□□ 0.36
IRF3-208ENST00000594387 CELA2BP08218 269 aaPredicted RBP17.28■□□□□ 0.36
IRF3-208ENST00000594387 SPINT3P49223 89 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 CLDN6P56747 220 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 CAMK2BQ13554 666 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 IHHQ14623 411 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 ITPRIPL1Q6GPH6 555 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 PROSER1Q86XN7 944 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 CDKL3Q8IVW4 592 aaPredicted RBP17.28■□□□□ 0.36
IRF3-208ENST00000594387 PELI3Q8N2H9 469 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 DCBLD1Q8N8Z6 715 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 SPATA22Q8NHS9 363 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 SCAMP4Q969E2 229 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 LRRC45Q96CN5 670 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 GRAMD1AQ96CP6 724 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 SMIM14Q96QK8 99 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 FRMD8Q9BZ67 464 aaPredicted RBP17.28■□□□□ 0.36
IRF3-208ENST00000594387 TSGA10Q9BZW7 698 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 DKK4Q9UBT3 224 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 RSPH14Q9UHP6 348 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 GPSM3Q9Y4H4 160 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 U3KQA8 63 aa17.28■□□□□ 0.36
IRF3-208ENST00000594387 INPP4BO15327 924 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 KRT86O43790 486 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 CEACAM5P06731 702 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 IVLP07476 585 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 NFKB1P19838 968 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 ADCY2Q08462 1091 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 SPIDRQ14159 915 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 PRPSAP1Q14558 356 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 DARS2Q6PI48 645 aaKnown RBP17.27■□□□□ 0.36
IRF3-208ENST00000594387 RBM44Q6ZP01 1051 aaKnown RBP17.27■□□□□ 0.36
IRF3-208ENST00000594387 LYSMD3Q7Z3D4 306 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 RNF10Q8N5U6 811 aaKnown RBP17.27■□□□□ 0.36
IRF3-208ENST00000594387 KYQ8NBH2 561 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 QKIQ96PU8 341 aaKnown RBP eCLIP17.27■□□□□ 0.36
IRF3-208ENST00000594387 CCDC3Q9BQI4 270 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 DESI2Q9BSY9 194 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 SPATA16Q9BXB7 569 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 UBP1Q9NZI7 540 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 SUFUQ9UMX1 484 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 SLC17A4Q9Y2C5 497 aa17.27■□□□□ 0.36
IRF3-208ENST00000594387 GRID2IPA4D2P6 1211 aa17.26■□□□□ 0.35
IRF3-208ENST00000594387 SRRM3A6NNA2 597 aaPredicted RBP17.26■□□□□ 0.35
IRF3-208ENST00000594387 B4DGG1 531 aa17.26■□□□□ 0.35
IRF3-208ENST00000594387 CSO75390 466 aaKnown RBP17.26■□□□□ 0.35
IRF3-208ENST00000594387 TCEA3O75764 348 aa17.26■□□□□ 0.35
IRF3-208ENST00000594387 ANXA9O76027 345 aa17.26■□□□□ 0.35
IRF3-208ENST00000594387 SLC4A1P02730 911 aa17.26■□□□□ 0.35
IRF3-208ENST00000594387 PTPN7P35236 360 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms