RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CTPS1P17812 591 aa22.58■■□□□ 1.21
SSBP4-203ENST00000593641 ACTR1BP42025 376 aa22.58■■□□□ 1.21
SSBP4-203ENST00000593641 ACTR1AP61163 376 aa22.58■■□□□ 1.21
SSBP4-203ENST00000593641 DPTQ07507 201 aa22.58■■□□□ 1.21
SSBP4-203ENST00000593641 TRA2AQ13595 282 aaKnown RBP eCLIP22.58■■□□□ 1.21
SSBP4-203ENST00000593641 PIGHQ14442 188 aaPredicted RBP22.58■■□□□ 1.21
SSBP4-203ENST00000593641 ANO6Q4KMQ2 910 aa22.58■■□□□ 1.21
SSBP4-203ENST00000593641 NAGSQ8N159 534 aa22.58■■□□□ 1.21
SSBP4-203ENST00000593641 CCDC112Q8NEF3 446 aa22.58■■□□□ 1.21
SSBP4-203ENST00000593641 TEKT4Q8WW24 435 aa22.58■■□□□ 1.21
SSBP4-203ENST00000593641 PATE1Q8WXA2 126 aa22.58■■□□□ 1.21
SSBP4-203ENST00000593641 OR2M4Q96R27 311 aa22.58■■□□□ 1.21
SSBP4-203ENST00000593641 IGHV5-10-1A0A0J9YXX1 117 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 SKILP12757 684 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 CD1CP29017 333 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 POLD2P49005 469 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 ATP1A2P50993 1020 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 LIMK2P53671 638 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 ITKQ08881 620 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 KRT81Q14533 505 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 LRRC66Q68CR7 880 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 ZNF574Q6ZN55 896 aaPredicted RBP22.57■■□□□ 1.2
SSBP4-203ENST00000593641 PTCD2Q8WV60 388 aaKnown RBP22.57■■□□□ 1.2
SSBP4-203ENST00000593641 AP2M1Q96CW1 435 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 TAAR9Q96RI9 348 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 BPIFA3Q9BQP9 254 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 ISCUQ9H1K1 167 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 NT5MQ9NPB1 228 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 CD84Q9UIB8 345 aa22.57■■□□□ 1.2
SSBP4-203ENST00000593641 WISP1O95388 367 aa22.56■■□□□ 1.2
SSBP4-203ENST00000593641 PYGLP06737 847 aa22.56■■□□□ 1.2
SSBP4-203ENST00000593641 FAM87AP0C7U9 286 aa22.56■■□□□ 1.2
SSBP4-203ENST00000593641 PPM1FP49593 454 aaPredicted RBP22.56■■□□□ 1.2
SSBP4-203ENST00000593641 TDRD12Q587J7 1177 aaKnown RBP22.56■■□□□ 1.2
SSBP4-203ENST00000593641 ADAMTSL4Q6UY14 1074 aa22.56■■□□□ 1.2
SSBP4-203ENST00000593641 TECPR1Q7Z6L1 1165 aa22.56■■□□□ 1.2
SSBP4-203ENST00000593641 LRRC49Q8IUZ0 686 aa22.56■■□□□ 1.2
SSBP4-203ENST00000593641 OR4D9Q8NGE8 314 aa22.56■■□□□ 1.2
SSBP4-203ENST00000593641 PIH1D2Q8WWB5 315 aa22.56■■□□□ 1.2
SSBP4-203ENST00000593641 JPH3Q8WXH2 748 aaPredicted RBP22.56■■□□□ 1.2
SSBP4-203ENST00000593641 SEMA3CQ99985 751 aa22.56■■□□□ 1.2
SSBP4-203ENST00000593641 DPYSL5Q9BPU6 564 aa22.56■■□□□ 1.2
SSBP4-203ENST00000593641 POLR1EQ9GZS1 481 aaKnown RBP22.56■■□□□ 1.2
SSBP4-203ENST00000593641 PCDH18Q9HCL0 1135 aa22.56■■□□□ 1.2
SSBP4-203ENST00000593641 KCNK4Q9NYG8 393 aa22.56■■□□□ 1.2
SSBP4-203ENST00000593641 PPIL1Q9Y3C6 166 aa22.56■■□□□ 1.2
SSBP4-203ENST00000593641 PPM1DO15297 605 aa22.55■■□□□ 1.2
SSBP4-203ENST00000593641 ZNF30P17039 623 aa22.55■■□□□ 1.2
SSBP4-203ENST00000593641 CSTF2P33240 577 aaKnown RBP eCLIP22.55■■□□□ 1.2
SSBP4-203ENST00000593641 EPHB1P54762 984 aa22.55■■□□□ 1.2
SSBP4-203ENST00000593641 PTPRRQ15256 657 aa22.55■■□□□ 1.2
SSBP4-203ENST00000593641 NKAIN2Q5VXU1 208 aa22.55■■□□□ 1.2
SSBP4-203ENST00000593641 AGBL5Q8NDL9 886 aa22.55■■□□□ 1.2
SSBP4-203ENST00000593641 SCARF2Q96GP6 870 aaPredicted RBP22.55■■□□□ 1.2
SSBP4-203ENST00000593641 ABCG8Q9H221 673 aa22.55■■□□□ 1.2
SSBP4-203ENST00000593641 STARD5Q9NSY2 213 aa22.55■■□□□ 1.2
SSBP4-203ENST00000593641 HAUS2Q9NVX0 235 aa22.55■■□□□ 1.2
SSBP4-203ENST00000593641 RCOR3Q9P2K3 495 aaPredicted RBP22.55■■□□□ 1.2
SSBP4-203ENST00000593641 IP6K2Q9UHH9 426 aa22.55■■□□□ 1.2
SSBP4-203ENST00000593641 PCDHGA3Q9Y5H0 932 aa22.55■■□□□ 1.2
SSBP4-203ENST00000593641 ST14Q9Y5Y6 855 aa22.55■■□□□ 1.2
SSBP4-203ENST00000593641 IGHV1OR21-1A0A087WYE8 117 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 SOD1P00441 154 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 PDHA1P08559 390 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 THRAP10827 490 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 FGF3P11487 239 aaPredicted RBP22.54■■□□□ 1.2
SSBP4-203ENST00000593641 WT1P19544 449 aaPredicted RBP22.54■■□□□ 1.2
SSBP4-203ENST00000593641 GPLD1P80108 840 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 TBR1Q16650 682 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 TXNRD3NBQ6F5E7 133 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 MARK2Q7KZI7 788 aaKnown RBP22.54■■□□□ 1.2
SSBP4-203ENST00000593641 ZNF765Q7L2R6 523 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 GALNT13Q8IUC8 556 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 TEX26Q8N6G2 289 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 IL22RA1Q8N6P7 574 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 NIPA2Q8N8Q9 360 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 AHCYL2Q96HN2 611 aaKnown RBP22.54■■□□□ 1.2
SSBP4-203ENST00000593641 ANAPC7Q9UJX3 599 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 DNPEPQ9ULA0 475 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 TMEM98Q9Y2Y6 226 aa22.54■■□□□ 1.2
SSBP4-203ENST00000593641 A0A0J9YYE9 177 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 A0A0U1RQS6 177 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 A0A1B0GTH6 734 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 FZD6O60353 706 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 TRBC1P01850 177 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 CSF2RBP32927 897 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 SSR1P43307 286 aaKnown RBP22.53■■□□□ 1.2
SSBP4-203ENST00000593641 CYP4F2P78329 520 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 SLC25A11Q02978 314 aaKnown RBP22.53■■□□□ 1.2
SSBP4-203ENST00000593641 LRP8Q14114 963 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 CCDC122Q5T0U0 273 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 RFLNAQ6ZTI6 216 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 TRIM74Q86UV6 250 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 ART4Q93070 314 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 SCAMP4Q969E2 229 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 BTBD6Q96KE9 485 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 SLC38A3Q99624 504 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 DDA1Q9BW61 102 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 THAP2Q9H0W7 228 aa22.53■■□□□ 1.2
SSBP4-203ENST00000593641 PLEKHM1Q9Y4G2 1056 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms