RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 GPR1P46091 355 aa23.84■■□□□ 1.41
LSM4-202ENST00000593564 TMEM164Q5U3C3 297 aa23.84■■□□□ 1.41
LSM4-202ENST00000593564 ADAMTSL4Q6UY14 1074 aa23.84■■□□□ 1.41
LSM4-202ENST00000593564 NAGSQ8N159 534 aa23.84■■□□□ 1.41
LSM4-202ENST00000593564 PATE1Q8WXA2 126 aa23.84■■□□□ 1.41
LSM4-202ENST00000593564 CDH19Q9H159 772 aa23.84■■□□□ 1.41
LSM4-202ENST00000593564 NT5MQ9NPB1 228 aa23.84■■□□□ 1.41
LSM4-202ENST00000593564 IP6K2Q9UHH9 426 aa23.84■■□□□ 1.41
LSM4-202ENST00000593564 BOD1L1Q8NFC6 3051 aa23.84■■□□□ 1.41
LSM4-202ENST00000593564 IGHV5-10-1A0A0J9YXX1 117 aa23.83■■□□□ 1.41
LSM4-202ENST00000593564 PDHA1P08559 390 aa23.83■■□□□ 1.41
LSM4-202ENST00000593564 BIRC2Q13490 618 aa23.83■■□□□ 1.41
LSM4-202ENST00000593564 NR1I3Q14994 352 aa23.83■■□□□ 1.41
LSM4-202ENST00000593564 HGSNATQ68CP4 663 aa23.83■■□□□ 1.41
LSM4-202ENST00000593564 LRRC66Q68CR7 880 aa23.83■■□□□ 1.41
LSM4-202ENST00000593564 VASH2Q86V25 355 aa23.83■■□□□ 1.41
LSM4-202ENST00000593564 NDUFAF2Q8N183 169 aa23.83■■□□□ 1.41
LSM4-202ENST00000593564 SEMA3CQ99985 751 aa23.83■■□□□ 1.41
LSM4-202ENST00000593564 THAP2Q9H0W7 228 aa23.83■■□□□ 1.41
LSM4-202ENST00000593564 ABCG8Q9H221 673 aa23.83■■□□□ 1.41
LSM4-202ENST00000593564 PCDHGA4Q9Y5G9 962 aa23.83■■□□□ 1.41
LSM4-202ENST00000593564 BZW2Q9Y6E2 419 aaKnown RBP23.83■■□□□ 1.41
LSM4-202ENST00000593564 SLC28A2O43868 658 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 CCL4P13236 92 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 IL4RP24394 825 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 ZNF165P49910 485 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 LIMK2P53671 638 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 SQSTM1Q13501 440 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 TRA2AQ13595 282 aaKnown RBP eCLIP23.82■■□□□ 1.4
LSM4-202ENST00000593564 KRT81Q14533 505 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 TDRD12Q587J7 1177 aaKnown RBP23.82■■□□□ 1.4
LSM4-202ENST00000593564 DOK6Q6PKX4 331 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 RFLNAQ6ZTI6 216 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 ZNF765Q7L2R6 523 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 NLRP8Q86W28 1048 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 ZSCAN1Q8NBB4 408 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 FAM71BQ8TC56 605 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 EXTL1Q92935 676 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 AP2M1Q96CW1 435 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 BTBD6Q96KE9 485 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 CCDC74BQ96LY2 380 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 OR2M4Q96R27 311 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 POLR1EQ9GZS1 481 aaKnown RBP23.82■■□□□ 1.4
LSM4-202ENST00000593564 CD84Q9UIB8 345 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 ANAPC7Q9UJX3 599 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 MYO18BQ8IUG5 2567 aa23.82■■□□□ 1.4
LSM4-202ENST00000593564 TLN1Q9Y490 2541 aaKnown RBP23.81■■□□□ 1.4
LSM4-202ENST00000593564 A0A0U1RQS6 177 aa23.81■■□□□ 1.4
LSM4-202ENST00000593564 PPM1DO15297 605 aa23.81■■□□□ 1.4
LSM4-202ENST00000593564 PYGLP06737 847 aa23.81■■□□□ 1.4
LSM4-202ENST00000593564 ZNF30P17039 623 aa23.81■■□□□ 1.4
LSM4-202ENST00000593564 ACTR1BP42025 376 aa23.81■■□□□ 1.4
LSM4-202ENST00000593564 ACTR1AP61163 376 aa23.81■■□□□ 1.4
LSM4-202ENST00000593564 PTSQ03393 145 aa23.81■■□□□ 1.4
LSM4-202ENST00000593564 ALG1LQ6GMV1 187 aa23.81■■□□□ 1.4
LSM4-202ENST00000593564 RCBTB1Q8NDN9 531 aa23.81■■□□□ 1.4
LSM4-202ENST00000593564 OR4D9Q8NGE8 314 aa23.81■■□□□ 1.4
LSM4-202ENST00000593564 SYN2Q92777 582 aaPredicted RBP23.81■■□□□ 1.4
LSM4-202ENST00000593564 TAAR9Q96RI9 348 aa23.81■■□□□ 1.4
LSM4-202ENST00000593564 ARHGAP9Q9BRR9 750 aa23.81■■□□□ 1.4
LSM4-202ENST00000593564 NUP85Q9BW27 656 aa23.81■■□□□ 1.4
LSM4-202ENST00000593564 PCDHGA3Q9Y5H0 932 aa23.81■■□□□ 1.4
LSM4-202ENST00000593564 IGHV1OR21-1A0A087WYE8 117 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 A0A0J9YYE9 177 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 STMND1H3BQB6 276 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 SERPINC1P01008 464 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 TRBC1P01850 177 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 CYP1A2P05177 515 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 GARSP41250 739 aaKnown RBP23.8■■□□□ 1.4
LSM4-202ENST00000593564 ITKQ08881 620 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 GALNT2Q10471 571 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 MMRN1Q13201 1228 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 MAML1Q92585 1016 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 SCAMP4Q969E2 229 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 SMIM14Q96QK8 99 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 DPYSL5Q9BPU6 564 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 DNPEPQ9ULA0 475 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 TMEM98Q9Y2Y6 226 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 PLEKHM1Q9Y4G2 1056 aa23.8■■□□□ 1.4
LSM4-202ENST00000593564 A0A1W2PQJ5 194 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 MFSD11O43934 449 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 CD48P09326 243 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 THRAP10827 490 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 FGF3P11487 239 aaPredicted RBP23.79■■□□□ 1.4
LSM4-202ENST00000593564 WT1P19544 449 aaPredicted RBP23.79■■□□□ 1.4
LSM4-202ENST00000593564 CES1P23141 567 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 CSF2RBP32927 897 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 ARSEP51690 589 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 STC1P52823 247 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 NFATC3Q12968 1075 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 LRP8Q14114 963 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 PYCR3Q53H96 274 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 NKAIN2Q5VXU1 208 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 TRIM74Q86UV6 250 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 FATE1Q969F0 183 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 COX14Q96I36 57 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 AMACRQ9UHK6 382 aa23.79■■□□□ 1.4
LSM4-202ENST00000593564 MYO1FO00160 1098 aa23.78■■□□□ 1.4
LSM4-202ENST00000593564 FASLGP48023 281 aa23.78■■□□□ 1.4
LSM4-202ENST00000593564 ARSDP51689 593 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms